pascal SIMONET
pascal SIMONET
"Environmental Microbial Genomics group" Lab. Ampere, UMR CNRS 5005, Ecole Centrale de Lyon
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Detection and enumeration of bacteria in soil by direct DNA extraction and polymerase chain reaction
C Picard, C Ponsonnet, E Paget, X Nesme, P Simonet
Applied and Environmental Microbiology 58 (9), 2717-2722, 1992
Quantification of bias related to the extraction of DNA directly from soils
ÅSA Frostegård, S Courtois, V Ramisse, S Clerc, D Bernillon, F Le Gall, ...
Applied and environmental microbiology 65 (12), 5409-5420, 1999
Recombinant environmental libraries provide access to microbial diversity for drug discovery from natural products
S Courtois, CM Cappellano, M Ball, FX Francou, P Normand, G Helynck, ...
Applied and environmental microbiology 69 (1), 49-55, 2003
Extraction of DNA from soil
P Robe, R Nalin, C Capellano, TM Vogel, P Simonet
European Journal of Soil Biology 39 (4), 183-190, 2003
Accessing the soil metagenome for studies of microbial diversity
TO Delmont, P Robe, S Cecillon, IM Clark, F Constancias, P Simonet, ...
Applied and environmental microbiology 77 (4), 1315-1324, 2011
Critical knowledge gaps and research needs related to the environmental dimensions of antibiotic resistance
DGJ Larsson, A Andremont, J Bengtsson-Palme, KK Brandt, ...
Environment international 117, 132-138, 2018
In situ transfer of antibiotic resistance genes from transgenic (transplastomic) tobacco plants to bacteria
E Kay, TM Vogel, F Bertolla, R Nalin, P Simonet
Applied and environmental microbiology 68 (7), 3345-3351, 2002
TerraGenome: a consortium for the sequencing of a soil metagenome
TM Vogel, P Simonet, JK Jansson, PR Hirsch, JM Tiedje, JD Van Elsas, ...
Nature Reviews Microbiology 7 (4), 252-252, 2009
Large-scale metagenomic-based study of antibiotic resistance in the environment
J Nesme, S Cécillon, TO Delmont, JM Monier, TM Vogel, P Simonet
Current biology 24 (10), 1096-1100, 2014
Soil-specific limitations for access and analysis of soil microbial communities by metagenomics
N Lombard, E Prestat, JD van Elsas, P Simonet
FEMS microbiology ecology 78 (1), 31-49, 2011
Evaluation of biological and physical protection against nuclease degradation of clay-bound plasmid DNA
S Demaneche, L Jocteur-Monrozier, H Quiquampoix, P Simonet
Applied and environmental microbiology 67 (1), 293-299, 2001
Adsorption of DNA on clay minerals: protection against DNaseI and influence on gene transfer
E Paget, LJ Monrozier, P Simonet
FEMS Microbiology Letters 97 (1-2), 31-39, 1992
The soil resistome: a critical review on antibiotic resistance origins, ecology and dissemination potential in telluric bacteria
J Nesme, P Simonet
Environmental microbiology 17 (4), 913-930, 2015
Characterization of natural populations of Nitrobacter spp. using PCR/RFLP analysis of the ribosomal intergenic spacer
E Navarro, P Simonet, P Normand, R Bardin
Archives of Microbiology 157 (2), 107-115, 1992
Quantification of bacterial subgroups in soil: comparison of DNA extracted directly from soil or from cells previously released by density gradient centrifugation
S Courtois, Å Frostegård, P Göransson, G Depret, P Jeannin, P Simonet
Environmental Microbiology 3 (7), 431-439, 2001
Structure, fluctuation and magnitude of a natural grassland soil metagenome
TO Delmont, E Prestat, KP Keegan, M Faubladier, P Robe, IM Clark, ...
The ISME journal 6 (9), 1677-1687, 2012
Microbial mass movements
YG Zhu, M Gillings, P Simonet, D Stekel, S Banwart, J Penuelas
Science 357 (6356), 1099-1100, 2017
On the track of natural transformation in soil
E Paget, P Simonet
FEMS microbiology ecology 15 (1-2), 109-117, 1994
Antibiotic-resistant soil bacteria in transgenic plant fields
S Demanèche, H Sanguin, J Poté, E Navarro, D Bernillon, P Mavingui, ...
Proceedings of the National Academy of Sciences 105 (10), 3957-3962, 2008
Phylogenetic analysis of polyketide synthase I domains from soil metagenomic libraries allows selection of promising clones
A Ginolhac, C Jarrin, B Gillet, P Robe, P Pujic, K Tuphile, H Bertrand, ...
Applied and Environmental Microbiology 70 (9), 5522-5527, 2004
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