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Bojk A. Berghuis
Bojk A. Berghuis
Postdoctoral Scholar, Stanford University
Adresse e-mail validée de stanford.edu
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Année
Hydrogenotrophic methanogenesis in archaeal phylum Verstraetearchaeota reveals the shared ancestry of all methanogens
BA Berghuis, FB Yu, F Schulz, PC Blainey, T Woyke, SR Quake
Proceedings of the National Academy of Sciences 116 (11), 5037-5044, 2019
1782019
A force calibration standard for magnetic tweezers
Z Yu, D Dulin, J Cnossen, M Köber, MM van Oene, O Ordu, BA Berghuis, ...
Review of Scientific Instruments 85 (12), 2014
802014
Elongation-competent pauses govern the fidelity of a viral RNA-dependent RNA polymerase
D Dulin, ID Vilfan, BA Berghuis, S Hage, DH Bamford, MM Poranen, ...
Cell reports 10 (6), 983-992, 2015
742015
Invincible DNA tethers: covalent DNA anchoring for enhanced temporal and force stability in magnetic tweezers experiments
R Janissen, BA Berghuis, D Dulin, M Wink, T van Laar, NH Dekker
Nucleic acids research 42 (18), e137-e137, 2014
612014
Strand separation establishes a sustained lock at the Tus–Ter replication fork barrier
BA Berghuis, D Dulin, ZQ Xu, T Van Laar, B Cross, R Janissen, S Jergic, ...
Nature chemical biology 11 (8), 579-585, 2015
492015
Untangling reaction pathways through modern approaches to high-throughput single-molecule force-spectroscopy experiments
D Dulin, BA Berghuis, M Depken, NH Dekker
Current opinion in structural biology 34, 116-122, 2015
412015
High-throughput, high-force probing of DNA-protein interactions with magnetic tweezers
BA Berghuis, M Köber, T van Laar, NH Dekker
Methods 105, 90-98, 2016
372016
Backtracking behavior in viral RNA-dependent RNA polymerase provides the basis for a second initiation site
D Dulin, ID Vilfan, BA Berghuis, MM Poranen, M Depken, NH Dekker
Nucleic acids research 43 (21), 10421-10429, 2015
352015
What is all this fuss about Tus? Comparison of recent findings from biophysical and biochemical experiments
BA Berghuis, VS Raducanu, MM Elshenawy, S Jergic, M Depken, ...
Critical Reviews in Biochemistry and Molecular Biology 53 (1), 49-63, 2018
202018
Exploring the structure of the N-terminal domain of CP29 with ultrafast fluorescence spectroscopy
BA Berghuis, RB Spruijt, RBM Koehorst, A van Hoek, SP Laptenok, ...
European Biophysics Journal 39, 631-638, 2010
162010
Northstar enables automatic classification of known and novel cell types from tumor samples
F Zanini, BA Berghuis, RC Jones, B Nicolis di Robilant, RY Nong, ...
Scientific reports 10 (1), 15251, 2020
112020
A force calibration standard for magnetic tweezers
Z Yu, D Dulin, JP Cnossen, M Kober, MM van Oene, O Ordu, BA Berghuis, ...
Review of Scientific Instruments 85, 1-10, 2015
22015
Real-time observation of replicative helicase assembly onto single-stranded DNA
D Dulin, Z Yu, TJ Cui, BA Berghuis, M Depken, NH Dekker
BioRxiv, 077800, 2016
12016
Single Molecule Studies of DNA-Binding Proteins: Development of New Covalent DNA Anchoring Techniques for the Study of Rupture Forces of Replication Blocks
R Janissen, BA Berghuis, O Ordu, MM Wink, D Dulin, JP Cnossen, ...
Biophysical Journal 106 (2), 394a, 2014
12014
northstar: leveraging cell atlases to identify healthy and neoplastic cells in transcriptomes from human tumors
F Zanini, BA Berghuis, RC Jones, BN di Robilant, RY Nong, J Norton, ...
bioRxiv, 820928, 2019
2019
Dissection of E. Coli DNA Replication in High Resolution with Temperature-Controlled Magnetic Tweezers
BA Berghuis, JPA Wassenburg, JM Wilschut, T van Laar, NE Dixon, ...
Biophysical Journal 110 (3), 63a, 2016
2016
Enhanced interrogation of DNA roadblocks and RNA polymerases: Pulling information fkom the individual to understand the masses
B Berghuis
2016
SV40 Helicase Unwinds DNA against Force
M Koeber, Z Yu, K Aguan, B Berghuis, D Dulin, NH Dekker
Biophysical Journal 106 (2), 273a, 2014
2014
Roadblocks on the E. Coli genome: the Workings of a molecular mouse trap at the single-molecule level
BA Berghuis, D Dulin, B Cross, NE Dixon, NH Dekker
Biophysical Journal 106 (2), 230a, 2014
2014
SV40 Helicase unwinds DNA against force
M Kober, Z Yu, K Aguan, BA Berghuis, D Dulin, NH Dekker
Biophysical Journal 106 (2), 1-3, 2014
2014
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