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Ernesto Caffarena
Ernesto Caffarena
Verified email at fiocruz.br
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Cited by
Year
Boosting docking-based virtual screening with deep learning
JC Pereira, ER Caffarena, CN Dos Santos
Journal of chemical information and modeling 56 (12), 2495-2506, 2016
3462016
Elastic properties, Young's modulus determination and structural stability of the tropocollagen molecule: a computational study by steered molecular dynamics
AC Lorenzo, ER Caffarena
Journal of biomechanics 38 (7), 1527-1533, 2005
1882005
Integrating molecular docking and molecular dynamics simulations
LHS Santos, RS Ferreira, ER Caffarena
Docking screens for drug discovery, 13-34, 2019
1352019
Toll-like receptor 1 N248S single-nucleotide polymorphism is associated with leprosy risk and regulates immune activation during mycobacterial infection
C de Sales Marques, VN Brito-de-Souza, LTA Guerreiro, JH Martins, ...
The Journal of infectious diseases 208 (1), 120-129, 2013
772013
Evaluation of 7-arylaminopyrazolo [1, 5-a] pyrimidines as anti-Plasmodium falciparum, antimalarial, and Pf-dihydroorotate dehydrogenase inhibitors
LFSP Azeredo, JP Coutinho, VAP Jabor, PR Feliciano, MC Nonato, ...
European Journal of Medicinal Chemistry 126, 72-83, 2017
662017
Genomic and structural features of the yellow fever virus from the 2016–2017 Brazilian outbreak
MM Gómez, FVS Abreu, AAC Santos, IS Mello, MP Santos, IP Ribeiro, ...
Journal of General Virology 99 (4), 536-548, 2018
562018
Caracterização do envelhecimento populacional no município do Rio de Janeiro: contribuições para políticas públicas sustentáveis
DSB Alves, MTS Barbosa, ER Caffarena, AS Silva
Cadernos Saúde Coletiva 24, 63-69, 2016
532016
Hydrogen Bonding of carboxylic acids in aqueous solutions—UV spectroscopy, viscosity, and molecular simulation of acetic acid
G Ruderman, ER Caffarena, IG Mogilner, EJ Tolosa
Journal of solution chemistry 27, 935-948, 1998
491998
Glass transition in aqueous solutions of glucose. Molecular dynamics simulation
ER Caffarena, JR Grigera
Carbohydrate research 300 (1), 51-57, 1997
481997
Hydration of glucose in the rubbery and glassy states studied by molecular dynamics simulation
ER Caffarena, JR Grigera
Carbohydrate research 315 (1-2), 63-69, 1999
431999
Epoxy-α-Lapachone Has In Vitro and In Vivo Anti-Leishmania (Leishmania) amazonensis Effects and Inhibits Serine Proteinase Activity in This Parasite
F Souza-Silva, SC Bourguignon, BAS Pereira, LMC Côrtes, ...
Antimicrobial agents and chemotherapy 59 (4), 1910-1918, 2015
392015
Naturally Occurring Genetic Variants of Human Caspase‐1 Differ Considerably in Structure and the Ability to Activate Interleukin‐1β
H Luksch, MJ Romanowski, O Chara, V Tüngler, ER Caffarena, ...
Human mutation 34 (1), 122-131, 2013
392013
Using RNA sequence and structure for the prediction of riboswitch aptamer: a comprehensive review of available software and tools
D Antunes, NAN Jorge, ER Caffarena, F Passetti
Frontiers in genetics 8, 314477, 2018
372018
On the hydrogen bond structure of water at different densities
ER Caffarena, JR Grigera
Physica A: Statistical Mechanics and its Applications 342 (1-2), 34-39, 2004
372004
Computational drug design strategies applied to the modelling of human immunodeficiency virus-1 reverse transcriptase inhibitors
LH Santos, RS Ferreira, ER Caffarena
Memórias do Instituto Oswaldo Cruz 110, 847-864, 2015
352015
Structural and molecular modeling features of P2X receptors
LA Alves, JHM Da Silva, DNM Ferreira, AA Fidalgo-Neto, PCN Teixeira, ...
International journal of molecular sciences 15 (3), 4531-4549, 2014
342014
Synthesis, antimalarial evaluation and molecular modeling studies of hydroxyethylpiperazines, potential aspartyl protease inhibitors, part 2
W Cunico, CRB Gomes, V Facchinetti, M Moreth, C Penido, ...
European journal of medicinal chemistry 44 (9), 3816-3820, 2009
332009
In silico predicted epitopes from the COOH-terminal extension of cysteine proteinase B inducing distinct immune responses during Leishmania (Leishmania) amazonensis …
BAS Pereira, FS Silva, KM Rebello, M Marín-Villa, YM Traub-Cseko, ...
BMC immunology 12, 1-12, 2011
322011
In silico analysis of the V66M variant of human BDNF in psychiatric disorders: An approach to precision medicine
CCS De Oliveira, GRC Pereira, JYS De Alcantara, D Antunes, ...
Plos one 14 (4), e0215508, 2019
302019
Computational modeling of the bHLH domain of the transcription factor TWIST1 and R118C, S144R and K145E mutants
AM Maia, JHM da Silva, AL Mencalha, ER Caffarena, E Abdelhay
BMC bioinformatics 13, 1-13, 2012
282012
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Articles 1–20