Rémi Planel
Rémi Planel
Institut Pasteur - Department of Computational Biology - Bioinformatics and Biostatistics HUB
Adresse e-mail validée de pasteur.fr
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Molecular organization, biochemical function, cellular role and evolution of NfuA, an atypical Fe‐S carrier
B Py, C Gerez, S Angelini, R Planel, D Vinella, L Loiseau, E Talla, ...
Molecular microbiology 86 (1), 155-171, 2012
772012
MicroScope—an integrated resource for community expertise of gene functions and comparative analysis of microbial genomic and metabolic data
C Médigue, A Calteau, S Cruveiller, M Gachet, G Gautreau, A Josso, ...
Briefings in bioinformatics 20 (4), 1071-1084, 2019
332019
MicroScope: an integrated platform for the annotation and exploration of microbial gene functions through genomic, pangenomic and metabolic comparative analysis
D Vallenet, A Calteau, M Dubois, P Amours, A Bazin, M Beuvin, L Burlot, ...
Nucleic Acids Research 48 (D1), D579-D589, 2020
282020
Ribosomal proteins: toward a next generation standard for prokaryotic systematics?
HG Ramulu, M Groussin, E Talla, R Planel, V Daubin, C Brochier-Armanet
Molecular phylogenetics and evolution 75, 103-117, 2014
272014
Ancestral Genome Estimation Reveals the History of Ecological Diversification in Agrobacterium
F Lassalle, R Planel, S Penel, D Chapulliot, V Barbe, A Dubost, A Calteau, ...
Genome biology and evolution 9 (12), 3413-3431, 2017
162017
No evidence that nitrogen limitation influences the elemental composition of isopod transcriptomes and proteomes
CM Francois, L Duret, L Simon, F Mermillod-Blondin, F Malard, ...
Molecular Biology and Evolution 33 (10), 2605-2620, 2016
62016
RecPhyloXML: a format for reconciled gene trees
W Duchemin, G Gence, AM Arigon Chifolleau, L Arvestad, MS Bansal, ...
Bioinformatics 34 (21), 3646-3652, 2018
52018
PPanGGOLiN: Depicting microbial diversity via a partitioned pangenome graph
G Gautreau, A Bazin, M Gachet, R Planel, L Burlot, M Dubois, A Perrin, ...
PLoS computational biology 16 (3), e1007732, 2020
42020
On-target activity predictions enable improved CRISPR–dCas9 screens in bacteria
A Calvo-Villamañán, JW Ng, R Planel, H Ménager, A Chen, L Cui, ...
Nucleic Acids Research 48 (11), e64-e64, 2020
32020
NETSYN: NETwork SYNteny, a new tool to help functional annotation
B VIART, K BASTARD, G REBOUL, H PEREIRA, R PLANEL, M STAM, ...
Biologie, Informatiqueet Mathématiques, 120, 0
GenomeOnRails: depicting microbial species diversity via a pangenome graph
G GAUTREAU, R PLANEL, A PERRIN, M TOUCHON, E ROCHA
Biologie, Informatiqueet Mathématiques, 31, 0
MICROSCOPE: an integrated platform for the Exploration and Curation of Microbrial Genomes
D VALLENET, A CALTEAU, S CRUVEILLER, M GACHET, G GAUTREAU, ...
Biologie, Informatiqueet Mathématiques, 119, 0
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