Stéphanie BOCS
Stéphanie BOCS
Chercheur bioinformatique, Cirad
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The banana (Musa acuminata) genome and the evolution of monocotyledonous plants
A D’hont, F Denoeud, JM Aury, FC Baurens, F Carreel, O Garsmeur, ...
Nature 488 (7410), 213-217, 2012
The genome sequence of the entomopathogenic bacterium Photorhabdus luminescens
E Duchaud, C Rusniok, L Frangeul, C Buchrieser, A Givaudan, S Taourit, ...
Nature biotechnology 21 (11), 1307-1313, 2003
The genome of Theobroma cacao
X Argout, J Salse, JM Aury, MJ Guiltinan, G Droc, J Gouzy, M Allegre, ...
Nature genetics 43 (2), 101, 2011
MaGe: a microbial genome annotation system supported by synteny results
D Vallenet, L Labarre, Z Rouy, V Barbe, S Bocs, S Cruveiller, A Lajus, ...
Nucleic acids research 34 (1), 53-65, 2006
The coffee genome provides insight into the convergent evolution of caffeine biosynthesis
F Denoeud, L Carretero-Paulet, A Dereeper, G Droc, R Guyot, M Pietrella, ...
science 345 (6201), 1181-1184, 2014
“Candidatus Cloacamonas acidaminovorans”: genome sequence reconstruction provides a first glimpse of a new bacterial division
E Pelletier, A Kreimeyer, S Bocs, Z Rouy, G Gyapay, R Chouari, D Rivière, ...
Journal of bacteriology 190 (7), 2572-2579, 2008
AMIGene: annotation of microbial genes
S Bocs, S Cruveiller, D Vallenet, G Nuel, C Medigue
Nucleic acids research 31 (13), 3723-3726, 2003
The sugarcane genome challenge: strategies for sequencing a highly complex genome
GM Souza, H Berges, S Bocs, R Casu, A D’Hont, JE Ferreira, R Henry, ...
Tropical plant biology 4 (3-4), 145-156, 2011
The banana genome hub
G Droc, D Lariviere, V Guignon, N Yahiaoui, D This, O Garsmeur, ...
Database 2013, 2013
Three infectious viral species lying in wait in the banana genome
M Chabannes, FC Baurens, PO Duroy, S Bocs, MS Vernerey, ...
Journal of virology 87 (15), 8624-8637, 2013
Re-annotation of genome microbial coding-sequences: finding new genes and inaccurately annotated genes
S Bocs, A Danchin, C Médigue
BMC bioinformatics 3 (1), 5, 2002
High homologous gene conservation despite extreme autopolyploid redundancy in sugarcane
O Garsmeur, C Charron, S Bocs, V Jouffe, S Samain, A Couloux, G Droc, ...
New Phytologist 189 (2), 629-642, 2011
Expression patterns of cell wall-modifying genes from banana during fruit ripening and in relationship with finger drop
D Mbéguié-A-Mbéguié, O Hubert, FC Baurens, T Matsumoto, M Chillet, ...
Journal of Experimental Botany 60 (7), 2021-2034, 2009
The coffee genome hub: a resource for coffee genomes
A Dereeper, S Bocs, M Rouard, V Guignon, S Ravel, ...
Nucleic acids research 43 (D1), D1028-D1035, 2015
Expansion of banana (Musa acuminata) gene families involved in ethylene biosynthesis and signalling after lineage‐specific whole‐genome duplications
C Jourda, C Cardi, D Mbéguié‐A‐Mbéguié, S Bocs, O Garsmeur, ...
new phytologist 202 (3), 986-1000, 2014
Ten steps to get started in Genome Assembly and Annotation
VD Del Angel, E Hjerde, L Sterck, S Capella-Gutierrez, C Notredame, ...
F1000Research 7, 2018
MICheck: a web tool for fast checking of syntactic annotations of bacterial genomes
S Cruveiller, J Le Saux, D Vallenet, A Lajus, S Bocs, C Medigue
Nucleic acids research 33 (suppl_2), W471-W479, 2005
The genome draft of coconut (Cocos nucifera)
Y Xiao, P Xu, H Fan, L Baudouin, W Xia, S Bocs, J Xu, Q Li, A Guo, L Zhou, ...
GigaScience 6 (11), gix095, 2017
Impact of Austropuccinia psidii in New Caledonia, a biodiversity hotspot
J Soewarto, F Carriconde, N Hugot, S Bocs, C Hamelin, L Maggia
Forest Pathology 48 (2), e12402, 2018
Mechanisms of haplotype divergence at the RGA08 nucleotide-binding leucine-rich repeat gene locus in wild banana (Musa balbisiana)
FC Baurens, S Bocs, M Rouard, T Matsumoto, RNG Miller, ...
BMC plant biology 10 (1), 149, 2010
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