Rafael R C Cuadrat
Rafael R C Cuadrat
Berlin Institute for Medical Systems Biology (BIMSB) / Max Delbrück Center (MDC)
Adresse e-mail validée de mdc-berlin.de
Titre
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Année
ProtozoaDB: dynamic visualization and exploration of protozoan genomes
AMR Davila, PN Mendes, G Wagner, DA Tschoeke, RRC Cuadrat, ...
Nucleic acids research 36 (suppl_1), D547-D552, 2007
282007
Recovering genomics clusters of secondary metabolites from lakes using genome-resolved metagenomics
RRC Cuadrat, D Ionescu, AMR Dávila, HP Grossart
Frontiers in microbiology 9, 251, 2018
232018
OrthoSearch: a scientific workflow approach to detect distant homologies on protozoans
SMS da Cruz, V Batista, AMR Dávila, E Silva, F Tosta, C Vilela, ...
Proceedings of the 2008 ACM symposium on Applied computing, 1282-1286, 2008
182008
Distribution and classification of serine β-lactamases in Brazilian hospital sewage and other environmental metagenomes deposited in public databases
AM Fróes, FF da Mota, RRC Cuadrat, AMR Dávila
Frontiers in microbiology 7, 1790, 2016
142016
Detecting distant homologies on protozoans metabolic pathways using scientific workflows
SMSD Cruz, V Batista, E Silva, F Tosta, C Vilela, R Cuadrat, D Tschoeke, ...
International journal of data mining and bioinformatics 4 (3), 256-280, 2010
142010
An orthology-based analysis of pathogenic protozoa impacting global health: an improved comparative genomics approach with prokaryotes and model eukaryote orthologs
RRC Cuadrat, SM da Serra Cruz, DA Tschoeke, E Silva, F Tosta, H Jucá, ...
Omics: a journal of integrative biology 18 (8), 524-538, 2014
122014
The structure of microbial populations in Nelore GIT reveals inter-dependency of methanogens in feces and rumen
BGN Andrade, FA Bressani, RRC Cuadrat, PC Tizioto, PSN de Oliveira, ...
Journal of animal science and biotechnology 11 (1), 1-10, 2020
102020
Global ocean resistome revealed: Exploring antibiotic resistance gene abundance and distribution in TARA Oceans samples
RRC Cuadrat, M Sorokina, BG Andrade, T Goris, AMR Davila
GigaScience 9 (5), giaa046, 2020
92020
Metagenomic analysis of upwelling-affected Brazilian coastal seawater reveals sequence domains of type I PKS and modular NRPS
RRC Cuadrat, JC Cury, AMR Dávila
International journal of molecular sciences 16 (12), 28285-28295, 2015
72015
Nasopharyngeal microbial communities of patients infected with SARS-CoV-2 that developed COVID-19
MP Ventero, RRC Cuadrat, I Vidal, BGN Andrade, C Molina-Pardines, ...
Frontiers in Microbiology 12, 560, 2021
62021
Picoplankton bloom in global south? A high fraction of aerobic anoxygenic phototrophic bacteria in metagenomes from a coastal bay (Arraial do Cabo—Brazil)
RRC Cuadrat, I Ferrera, HP Grossart, AMR Dávila
Omics: a journal of integrative biology 20 (2), 76-87, 2016
62016
Towards a comprehensive search of putative chitinases sequences in environmental metagenomic databases
AS Romão-Dumaresq, AM Fróes, RRC Cuadrat, FP Silva, AMR Dávila
Natural Science 2014, 2014
62014
Replication of 15 loci involved in human plasma protein N-glycosylation in 4802 samples from four cohorts
SZ Sharapov, AS Shadrina, YA Tsepilov, EE Elgaeva, ES Tiys, ...
Glycobiology 31 (2), 82-88, 2021
52021
Desaturase activity and the risk of type 2 diabetes and coronary artery disease: a Mendelian randomization study
S Jäger, R Cuadrat, P Hoffmann, C Wittenbecher, MB Schulze
Nutrients 12 (8), 2261, 2020
52020
Dolosigranulum pigrum modulates immunity against SARS-CoV-2 in respiratory epithelial cells
M Islam, L Albarracin, V Melnikov, BGN Andrade, RRC Cuadrat, ...
Pathogens 10 (6), 634, 2021
22021
Putative mobilized colistin resistance genes in the human gut microbiome
BG Andrade, T Goris, H Afli, FH Coutinho, AMR Davila, ...
bioRxiv, 2020.12. 31.424960, 2021
12021
Mendelian randomization study on amino acid metabolism suggests tyrosine as causal trait for type 2 diabetes
S Jäger, R Cuadrat, C Wittenbecher, A Floegel, P Hoffmann, C Prehn, ...
Nutrients 12 (12), 3890, 2020
12020
Homology Inference Based on a Reconciliation Approach for the Comparative Genomics of Protozoa
DA Campos, EC Pereira, R Jardim, RRC Cuadrat, JS Bernardes, ...
Evolutionary Bioinformatics 14, 1176934318785138, 2018
12018
Advanced glycation end-products, measured as skin autofluorescence, associate with vascular stiffness in diabetic, pre-diabetic and normoglycemic individuals: a cross-sectional …
A Birukov, R Cuadrat, E Polemiti, F Eichelmann, MB Schulze
Cardiovascular Diabetology 20 (1), 1-11, 2021
2021
Identification and characterization of human observational studies in nutritional epidemiology on gut microbiomics for joint data analysis
M Pinart, K Nimptsch, SK Forslund, K Schlicht, M Gueimonde, P Brigidi, ...
Nutrients 13 (9), 3292, 2021
2021
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