A survey on filter techniques for feature selection in gene expression microarray analysis C Lazar, J Taminau, S Meganck, D Steenhoff, A Coletta, C Molter, ... IEEE/ACM transactions on computational biology and bioinformatics 9 (4 …, 2012 | 675 | 2012 |
Batch effect removal methods for microarray gene expression data integration: a survey C Lazar, S Meganck, J Taminau, D Steenhoff, A Coletta, C Molter, ... Briefings in bioinformatics 14 (4), 469-490, 2013 | 365 | 2013 |
Low-complexity regions within protein sequences have position-dependent roles A Coletta, JW Pinney, DYW Solís, J Marsh, SR Pettifer, TK Attwood BMC systems biology 4, 1-13, 2010 | 266 | 2010 |
Unlocking the potential of publicly available microarray data using inSilicoDb and inSilicoMerging R/Bioconductor packages J Taminau, S Meganck, C Lazar, D Steenhoff, A Coletta, C Molter, ... BMC bioinformatics 13, 1-9, 2012 | 193 | 2012 |
The PRINTS database: a fine-grained protein sequence annotation and analysis resource—its status in 2012 TK Attwood, A Coletta, G Muirhead, A Pavlopoulou, PB Philippou, I Popov, ... Database 2012, bas019, 2012 | 190 | 2012 |
InSilico DB genomic datasets hub: an efficient starting point for analyzing genome-wide studies in GenePattern, Integrative Genomics Viewer, and R/Bioconductor A Coletta, C Molter, R Duqué, D Steenhoff, J Taminau, V De Schaetzen, ... Genome biology 13, 1-13, 2012 | 51 | 2012 |
inSilicoDb: an R/Bioconductor package for accessing human Affymetrix expert-curated datasets from GEO J Taminau, D Steenhoff, A Coletta, S Meganck, C Lazar, V de Schaetzen, ... Bioinformatics 27 (22), 3204-3205, 2011 | 48 | 2011 |
Crowdsourced direct-to-consumer genomic analysis of a family quartet M Corpas, W Valdivia-Granda, N Torres, B Greshake, A Coletta, A Knaus, ... BMC genomics 16, 1-16, 2015 | 19 | 2015 |
Grid and UTOPIA: an integrated approach to enacting and visualising in silico experiments in the life sciences S Pettifer, K Wolstencroft, P Alper, T Attwood, A Coletta, C Goble, P Li, ... International Conference on Data Integration in the Life Sciences, 59-70, 2007 | 18 | 2007 |
GENESHIFT: a nonparametric approach for integrating microarray gene expression data based on the inner product as a distance measure between the distributions of genes C Lazar, J Taminau, S Meganck, D Steenhoff, A Coletta, DYW Solis, ... IEEE/ACM transactions on computational biology and bioinformatics 10 (2 …, 2013 | 9 | 2013 |
CM et al., A survey on filter techniques for feature selection in gene expression microarray analysis C Lazar, J Taminau, S Meganck, D Steenhoff, A Coletta IEEE/ACM Trans. Comput. Biol. Bioinform 9 (4), 1106-1119, 2012 | 8 | 2012 |
Sequential application of feature selection and extraction for predicting breast cancer aggressiveness J Taminau, S Meganck, C Lazar, DY Weiss-Solis, A Coletta, N Walker, ... Computational Systems-Biology and Bioinformatics: First International …, 2010 | 2 | 2010 |
A complete public domain family genomics dataset M Corpas, M Cariaso, A Coletta, D Weiss, A Harrison, F Moran, H Yang bioRxiv, 000216, 2013 | 1 | 2013 |
InSilico DB: an online platform to collaboratively structure and export publicly available datasets from the Gene Expression Omnibus database A Coletta, C Molter, R Duqué, D Steenhoff, J Taminau, V de Schaetzen, ... Genome Biology 12 (Suppl 1), P33, 2011 | 1 | 2011 |
Benchmarking pre-processing and batch effect removal methods for Insilico DB: Genomics Big Data Infrastructure Q De Clerck, A Nowe, A Coletta, D Sengupta Bioinformatics: Integrating data, teams and disciplines 30, 30, 2014 | | 2014 |
Research article Low-complexity regions within protein sequences have position-dependent roles A Coletta, JW Pinney, DYW Solís, J Marsh, SR Pettifer, TK Attwood | | 2010 |