| USE-Net: Incorporating Squeeze-and-Excitation blocks into U-Net for prostate zonal segmentation of multi-institutional MRI datasets L Rundo, C Han, Y Nagano, J Zhang, R Hataya, C Militello, A Tangherloni, ... Neurocomputing 365, 31-43, 2019 | 244 | 2019 |
| Integrative single-cell RNA-seq and ATAC-seq analysis of human developmental hematopoiesis AM Ranzoni, A Tangherloni, I Berest, SG Riva, B Myers, PM Strzelecka, ... Cell stem cell 28 (3), 472-487. e7, 2021 | 228 | 2021 |
| Graphics processing units in bioinformatics, computational biology and systems biology MS Nobile, P Cazzaniga, A Tangherloni, D Besozzi Briefings in bioinformatics 18 (5), 870-885, 2017 | 164 | 2017 |
| MedGA: a novel evolutionary method for image enhancement in medical imaging systems L Rundo, A Tangherloni, MS Nobile, C Militello, D Besozzi, G Mauri, ... Expert Systems with Applications 119, 387-399, 2019 | 113 | 2019 |
| Proactive particles in swarm optimization: A settings-free algorithm for real-parameter single objective optimization problems A Tangherloni, L Rundo, MS Nobile 2017 IEEE congress on evolutionary computation (CEC), 1940-1947, 2017 | 57 | 2017 |
| Salp swarm optimization: a critical review M Castelli, L Manzoni, L Mariot, MS Nobile, A Tangherloni Expert Systems with Applications 189, 116029, 2022 | 54 | 2022 |
| Biochemical parameter estimation vs. benchmark functions: A comparative study of optimization performance and representation design A Tangherloni, S Spolaor, P Cazzaniga, D Besozzi, L Rundo, G Mauri, ... Applied Soft Computing 81, 105494, 2019 | 53 | 2019 |
| A novel framework for MR image segmentation and quantification by using MedGA L Rundo, A Tangherloni, P Cazzaniga, MS Nobile, G Russo, MC Gilardi, ... Computer methods and programs in biomedicine 176, 159-172, 2019 | 51 | 2019 |
| NeXt for neuro‐radiosurgery: a fully automatic approach for necrosis extraction in brain tumor MRI using an unsupervised machine learning technique L Rundo, C Militello, A Tangherloni, G Russo, S Vitabile, MC Gilardi, ... International Journal of Imaging Systems and Technology 28 (1), 21-37, 2018 | 49 | 2018 |
| Computational intelligence for parameter estimation of biochemical systems MS Nobile, A Tangherloni, L Rundo, S Spolaor, D Besozzi, G Mauri, ... 2018 IEEE congress on evolutionary computation (CEC), 1-8, 2018 | 46 | 2018 |
| Multimodal medical image registration using particle swarm optimization: A review L Rundo, A Tangherloni, C Militello, MC Gilardi, G Mauri 2016 IEEE Symposium Series on Computational Intelligence (SSCI), 1-8, 2016 | 45 | 2016 |
| CNN-based prostate zonal segmentation on T2-weighted MR images: a cross-dataset study L Rundo, C Han, J Zhang, R Hataya, Y Nagano, C Militello, C Ferretti, ... Neural Approaches to Dynamics of Signal Exchanges, 269-280, 2020 | 42 | 2020 |
| Quantitative biology: theory, computational methods, and models B Munsky, WS Hlavacek, LS Tsimring MIT Press, 2018 | 37 | 2018 |
| GenHap: a novel computational method based on genetic algorithms for haplotype assembly A Tangherloni, S Spolaor, L Rundo, MS Nobile, P Cazzaniga, G Mauri, ... BMC bioinformatics 20, 1-14, 2019 | 34 | 2019 |
| LASSIE: simulating large-scale models of biochemical systems on GPUs A Tangherloni, MS Nobile, D Besozzi, G Mauri, P Cazzaniga BMC bioinformatics 18, 1-18, 2017 | 27 | 2017 |
| HaraliCU: GPU-powered Haralick feature extraction on medical images exploiting the full dynamics of gray-scale levels L Rundo, A Tangherloni, S Galimberti, P Cazzaniga, R Woitek, E Sala, ... Parallel Computing Technologies: 15th International Conference, PaCT 2019 …, 2019 | 21 | 2019 |
| Analysis of single-cell RNA sequencing data based on autoencoders A Tangherloni, F Ricciuti, D Besozzi, P Liò, A Cvejic BMC bioinformatics 22 (1), 309, 2021 | 20* | 2021 |
| Reboot strategies in particle swarm optimization and their impact on parameter estimation of biochemical systems S Spolaor, A Tangherloni, L Rundo, MS Nobile, P Cazzaniga 2017 IEEE Conference on Computational Intelligence in Bioinformatics and …, 2017 | 20 | 2017 |
| SMGen: a generator of synthetic models of biochemical reaction networks SG Riva, P Cazzaniga, MS Nobile, S Spolaor, L Rundo, D Besozzi, ... Symmetry 14 (1), 119, 2022 | 11 | 2022 |
| A CUDA-powered method for the feature extraction and unsupervised analysis of medical images L Rundo, A Tangherloni, P Cazzaniga, M Mistri, S Galimberti, R Woitek, ... The Journal of Supercomputing 77 (8), 8514-8531, 2021 | 11 | 2021 |
Marco S. NobileAssociate Professor, Ca' Foscari University of VeniceAdresse e-mail validée de unive.it
