Knut Reinert
Knut Reinert
FU Berlin / MPI Molgen
Verified email at - Homepage
Cited by
Cited by
The sequence of the human genome
JC Venter, MD Adams, EW Myers, PW Li, RJ Mural, GG Sutton, HO Smith, ...
science 291 (5507), 1304-1351, 2001
The Genome Sequence of Drosophila melanogaster
MD Adams, SE Celniker, RA Holt, CA Evans, JD Gocayne, ...
Science 287 (5461), 2185-2195, 2000
A whole-genome assembly of Drosophila
EW Myers, GG Sutton, AL Delcher, IM Dew, DP Fasulo, MJ Flanigan, ...
Science 287 (5461), 2196-2204, 2000
Recent segmental duplications in the human genome
JA Bailey, Z Gu, RA Clark, K Reinert, RV Samonte, S Schwartz, ...
Science 297 (5583), 1003-1007, 2002
OpenMS–an open-source software framework for mass spectrometry
M Sturm, A Bertsch, C Gröpl, A Hildebrandt, R Hussong, E Lange, ...
BMC bioinformatics 9, 1-11, 2008
OpenMS: a flexible open-source software platform for mass spectrometry data analysis
HL Röst, T Sachsenberg, S Aiche, C Bielow, H Weisser, F Aicheler, ...
Nature methods 13 (9), 741-748, 2016
A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome
RJ Mural, MD Adams, EW Myers, HO Smith, GLG Miklos, R Wides, ...
Science 296 (5573), 1661-1671, 2002
SeqAn an efficient, generic C++ library for sequence analysis
A Döring, D Weese, T Rausch, K Reinert
BMC bioinformatics 9, 1-9, 2008
TOPP—the OpenMS proteomics pipeline
O Kohlbacher, K Reinert, C Gröpl, E Lange, N Pfeifer, O Schulz-Trieglaff, ...
Bioinformatics 23 (2), e191-e197, 2007
Computational pan-genomics: status, promises and challenges
Briefings in bioinformatics 19 (1), 118-135, 2018
Tools for label-free peptide quantification
S Nahnsen, C Bielow, K Reinert, O Kohlbacher
Molecular & Cellular Proteomics 12 (3), 549-556, 2013
Whole-genome shotgun assembly and comparison of human genome assemblies
S Istrail, GG Sutton, L Florea, AL Halpern, CM Mobarry, R Lippert, ...
Proceedings of the National Academy of Sciences 101 (7), 1916-1921, 2004
Lecture notes in computer science (including subseries lecture notes in artificial intelligence and lecture notes in bioinformatics): Preface
M Abe, K Aoki, G Ateniese, R Avanzi, Z Beerliová, O Billet, A Biryukov, ...
Lecture Notes in Computer Science (including subseries Lecture Notes in …, 2006
RazerS—fast read mapping with sensitivity control
D Weese, AK Emde, T Rausch, A Döring, K Reinert
Genome research 19 (9), 1646-1654, 2009
RazerS 3: faster, fully sensitive read mapping
D Weese, M Holtgrewe, K Reinert
Bioinformatics 28 (20), 2592-2599, 2012
Critical assessment of metagenome interpretation: the second round of challenges
F Meyer, A Fritz, ZL Deng, D Koslicki, TR Lesker, A Gurevich, G Robertson, ...
Nature methods 19 (4), 429-440, 2022
Approaching clinical proteomics: current state and future fields of application in fluid proteomics
R Apweiler, C Aslanidis, T Deufel, A Gerstner, J Hansen, D Hochstrasser, ...
Clinical chemistry and laboratory medicine 47 (6), 724-744, 2009
Flexbar 3.0–SIMD and multicore parallelization
JT Roehr, C Dieterich, K Reinert
Bioinformatics 33 (18), 2941-2942, 2017
Alignment of next-generation sequencing reads
K Reinert, B Langmead, D Weese, DJ Evers
Annual review of genomics and human genetics 16, 133-151, 2015
Computational strategies to combat COVID-19: useful tools to accelerate SARS-CoV-2 and coronavirus research
F Hufsky, K Lamkiewicz, A Almeida, A Aouacheria, C Arighi, A Bateman, ...
Briefings in bioinformatics 22 (2), 642-663, 2021
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