Sebastian M. Gygli
Sebastian M. Gygli
National Institute of Allergy and Infectious Diseases, National Institutes of Health
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Antimicrobial resistance in Mycobacterium tuberculosis: mechanistic and evolutionary perspectives
SM Gygli, S Borrell, A Trauner, S Gagneux
FEMS Microbiology Reviews 41 (3), 354-373, 2017
Treemmer: a tool to reduce large phylogenetic datasets with minimal loss of diversity
F Menardo, C Loiseau, D Brites, M Coscolla, SM Gygli, LK Rutaihwa, ...
BMC bioinformatics 19 (1), 1-8, 2018
Whole-genome sequencing for drug resistance profile prediction in Mycobacterium tuberculosis
SM Gygli, PM Keller, M Ballif, N Blöchliger, R Hömke, M Reinhard, ...
Antimicrobial agents and chemotherapy 63 (4), 2019
Transition bias influences the evolution of antibiotic resistance in Mycobacterium tuberculosis
JL Payne, F Menardo, A Trauner, S Borrell, SM Gygli, C Loiseau, ...
PLoS biology 17 (5), e3000265, 2019
Population Genomics of Francisella tularensis subsp. holarctica and its Implication on the Eco-Epidemiology of Tularemia in Switzerland
M Wittwer, E Altpeter, P Pilo, SM Gygli, C Beuret, F Foucault, ...
Frontiers in Cellular and Infection Microbiology 8, 89, 2018
Multiple introductions of Mycobacterium tuberculosis lineage 2–Beijing into Africa over centuries
LK Rutaihwa, F Menardo, D Stucki, SM Gygli, SD Ley, B Malla, ...
Frontiers in ecology and evolution 7, 112, 2019
Resource misallocation as a mediator of fitness costs in antibiotic resistance.
A Trauner, A Banaei-Esfahani, SM Gygli, P Warmer, J Feldmann, ...
bioRxiv, 456434, 2018
Local adaptation in populations of Mycobacterium tuberculosis endemic to the Indian Ocean Rim
F Menardo, LK Rutaihwa, M Zwyer, S Borrell, I Comas, EC Conceicao, ...
bioRxiv, 2020
Network analysis identifies regulators of lineage-specific phenotypes in Mycobacterium tuberculosis
A Banaei-Esfahani, A Trauner, SB Farnov, SM Gygli, TR Rustad, ...
bioRxiv, 2020
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