| Upper airway gene expression reveals suppressed immune responses to SARS-CoV-2 compared with other respiratory viruses E Mick, J Kamm, AO Pisco, K Ratnasiri, JM Babik, G Castañeda, ... Nature communications 11 (1), 5854, 2020 | 124 | 2020 |
| Clinical features, diagnostics, and outcomes of patients presenting with acute respiratory illness: A retrospective cohort study of patients with and without COVID-19 SJ Shah, PN Barish, PA Prasad, A Kistler, N Neff, J Kamm, LM Li, CY Chiu, ... EClinicalMedicine 27, 2020 | 81 | 2020 |
| Single mosquito metatranscriptomics identifies vectors, emerging pathogens and reservoirs in one assay J Batson, G Dudas, E Haas-Stapleton, AL Kistler, LM Li, P Logan, ... Elife 10, e68353, 2021 | 73 | 2021 |
| Unbiased metagenomic sequencing for pediatric meningitis in Bangladesh reveals neuroinvasive Chikungunya virus outbreak and other unrealized pathogens S Saha, A Ramesh, KL Kalantar, R Malaker, M Hasanuzzaman, LM Khan, ... mBio 10 (6), e02877-19, 2019 | 68 | 2019 |
| Quantifying transmission heterogeneity using both pathogen phylogenies and incidence time series LM Li, NC Grassly, C Fraser Molecular Biology and Evolution 34 (11), 2982–2995, 2017 | 40 | 2017 |
| Genomic analysis of emerging pathogens: methods, application and future trends LM Li, NC Grassly, C Fraser Genome Biology 15 (11), 541, 2014 | 32 | 2014 |
| Investigating Transfusion-Related Sepsis using Culture-Independent Metagenomic Sequencing E Crawford, J Kamm, S Miller, LM Li, S Caldera, A Lyden, D Yokoe, ... Clinical Infectious Diseases 71 (5), 1179–1185, 2019 | 31 | 2019 |
| Sentinel Case of Candida auris in the Western United States Following Prolonged Occult Colonization in a Returned Traveler from India MH Woodworth, D Dynerman, ED Crawford, SB Doernberg, ... Microbial Drug Resistance 25 (5), 677-680, 2019 | 18 | 2019 |
| Estimation of secondary household attack rates for emergent spike L452R severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) variants detected by genomic surveillance … J Peng, J Liu, SA Mann, AM Mitchell, MT Laurie, S Sunshine, G Pilarowski, ... Clinical Infectious Diseases 74 (1), 32-39, 2022 | 16 | 2022 |
| A minimal model for household effects in epidemics G Huber, M Kamb, K Kawagoe, LM Li, B Veytsman, D Yllanes, D Zigmond Physical Biology 17 (6), 065010, 2020 | 12 | 2020 |
| Serotype-specific immune responses to pneumococcal conjugate vaccine among children are significantly correlated by individual: Analysis of randomized controlled trial data M Lipsitch, LM Li, S Patterson, J Trammel, C Juergens, WC Gruber, ... Vaccine 36 (4), 473-478, 2018 | 12 | 2018 |
| Epidemic dynamics in inhomogeneous populations and the role of superspreaders K Kawagoe, M Rychnovsky, S Chang, G Huber, LM Li, J Miller, R Pnini, ... Physical Review Research 3 (3), 033283, 2021 | 9 | 2021 |
| Upper airway gene expression reveals suppressed immune responses to SARS-CoV-2 compared with other respiratory viruses. Nat Commun 11: 5854 E Mick, J Kamm, AO Pisco, K Ratnasiri, JM Babik, G Castañeda, ... | 9 | 2020 |
| Prolonged silent carriage, genomic virulence potential and transmission between staff and patients characterize a neonatal intensive care unit (NICU) outbreak of methicillin … S Madera, N McNeil, PH Serpa, J Kamm, C Pak, C Caughell, A Nichols, ... Infection Control & Hospital Epidemiology 44 (1), 40-46, 2023 | 8 | 2023 |
| Upper airway gene expression shows a more robust adaptive immune response to SARS-CoV-2 in children E Mick, A Tsitsiklis, N Spottiswoode, S Caldera, PH Serpa, AM Detweiler, ... Nature communications 13 (1), 3937, 2022 | 8 | 2022 |
| The impact of the COVID-19 preventive measures on influenza transmission: molecular and epidemiological evidence LK Tran, DW Huang, NK Li, LM Li, JA Palacios, HH Chang International Journal of Infectious Diseases 116, 11-13, 2022 | 7 | 2022 |
| Bergeyella cardium: Clinical Characteristics and Draft Genome of an Emerging Pathogen in Native and Prosthetic Valve Endocarditis JS Mulliken, C Langelier, JZ Budak, S Miller, D Dynerman, S Hao, LM Li, ... Open forum infectious diseases 6 (4), ofz134, 2019 | 6 | 2019 |
| A minimal model for household-based testing and tracing in epidemics G Huber, M Kamb, K Kawagoe, LM Li, A McGeever, J Miller, B Veytsman, ... Physical Biology 18 (4), 045002, 2021 | 4 | 2021 |
| Coalescent models for populations with time-varying population sizes and arbitrary offspring distributions C Fraser, LM Li bioRxiv, 131730, 2017 | 4 | 2017 |
| Using viral genomics to estimate undetected infections and extent of superspreading events for COVID-19 LM Li, P Ayscue medRxiv, 2020.05. 05.20092098, 2020 | 2 | 2020 |
