Barbara Bravi
Cited by
Cited by
The unconventionality of nature: biology, from noise to functional randomness
B Bravi, G Longo
International Conference on Unconventional Computation and Natural …, 2015
Extended Plefka expansion for stochastic dynamics
B Bravi, P Sollich, M Opper
Journal of Physics A: Mathematical and Theoretical 49 (19), 194003, 2016
Statistical physics approaches to subnetwork dynamics in biochemical systems
B Bravi, P Sollich
Physical biology 14 (4), 045010, 2017
Inference for dynamics of continuous variables: the Extended Plefka Expansion with hidden nodes
B Bravi, P Sollich
Journal of Statistical Mechanics: Theory and Experiment 2017 (6), 063404, 2017
RBM-MHC: A Semi-Supervised Machine-Learning Method for Sample-Specific Prediction of Antigen Presentation by HLA-I Alleles
B Bravi, J Tubiana, S Cocco, R Monasson, T Mora, AM Walczak
Cell systems 12 (2), 195-202. e9, 2021
Inferring hidden states in Langevin dynamics on large networks: Average case performance
B Bravi, M Opper, P Sollich
Physical Review E 95 (1), 012122, 2017
Direct coupling analysis of epistasis in allosteric materials
B Bravi, R Ravasio, C Brito, M Wyart
PLOS Computational Biology 16 (3), e1007630, 2020
Responses to auxin signals: an operating principle for dynamical sensitivity yet high resilience
S Grigolon, B Bravi, OC Martin
Royal Society open science 5 (1), 172098, 2018
Neoantigen quality predicts immunoediting in survivors of pancreatic cancer
M Łuksza, ZM Sethna, LA Rojas, J Lihm, B Bravi, Y Elhanati, K Soares, ...
Nature, 1-7, 2022
Probing T-cell response by sequence-based probabilistic modeling
B Bravi, VP Balachandran, BD Greenbaum, AM Walczak, T Mora, ...
PLOS Computational Biology 17 (9), e1009297, 2021
Path integral approaches to subnetwork description and inference
B Bravi
King's College London, 2016
Critical scaling in hidden state inference for linear Langevin dynamics
B Bravi, P Sollich
Journal of Statistical Mechanics: Theory and Experiment 2017 (6), 063504, 2017
Systematic model reduction captures the dynamics of extrinsic noise in biochemical subnetworks
B Bravi, KJ Rubin, P Sollich
J. Chem. Phys. 153, 025101, 2020
Modeling antigen presentation and immune recognition with Restricted Boltzmann Machines
B Bravi, S Cocco, R Monasson, T Mora, A Walczak
Bulletin of the American Physical Society 66, 2021
Il sistema immunitario attraverso la lente dell’inferenza statistica
B Bravi
Ithaca: Viaggio nella Scienza, 55-71, 2021
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