The unconventionality of nature: biology, from noise to functional randomness B Bravi, G Longo International Conference on Unconventional Computation and Natural …, 2015 | 29 | 2015 |

Extended Plefka expansion for stochastic dynamics B Bravi, P Sollich, M Opper Journal of Physics A: Mathematical and Theoretical 49 (19), 194003, 2016 | 15 | 2016 |

Statistical physics approaches to subnetwork dynamics in biochemical systems B Bravi, P Sollich Physical biology 14 (4), 045010, 2017 | 13 | 2017 |

Inference for dynamics of continuous variables: the Extended Plefka Expansion with hidden nodes B Bravi, P Sollich Journal of Statistical Mechanics: Theory and Experiment 2017 (6), 063404, 2017 | 12 | 2017 |

RBM-MHC: A Semi-Supervised Machine-Learning Method for Sample-Specific Prediction of Antigen Presentation by HLA-I Alleles B Bravi, J Tubiana, S Cocco, R Monasson, T Mora, AM Walczak Cell systems 12 (2), 195-202. e9, 2021 | 10 | 2021 |

Inferring hidden states in Langevin dynamics on large networks: Average case performance B Bravi, M Opper, P Sollich Physical Review E 95 (1), 012122, 2017 | 9 | 2017 |

Direct coupling analysis of epistasis in allosteric materials B Bravi, R Ravasio, C Brito, M Wyart PLOS Computational Biology 16 (3), e1007630, 2020 | 8 | 2020 |

Responses to auxin signals: an operating principle for dynamical sensitivity yet high resilience S Grigolon, B Bravi, OC Martin Royal Society open science 5 (1), 172098, 2018 | 7 | 2018 |

Neoantigen quality predicts immunoediting in survivors of pancreatic cancer M Łuksza, ZM Sethna, LA Rojas, J Lihm, B Bravi, Y Elhanati, K Soares, ... Nature, 1-7, 2022 | 5 | 2022 |

Probing T-cell response by sequence-based probabilistic modeling B Bravi, VP Balachandran, BD Greenbaum, AM Walczak, T Mora, ... PLOS Computational Biology 17 (9), e1009297, 2021 | 5 | 2021 |

Path integral approaches to subnetwork description and inference B Bravi King's College London, 2016 | 4 | 2016 |

Critical scaling in hidden state inference for linear Langevin dynamics B Bravi, P Sollich Journal of Statistical Mechanics: Theory and Experiment 2017 (6), 063504, 2017 | 2 | 2017 |

Systematic model reduction captures the dynamics of extrinsic noise in biochemical subnetworks B Bravi, KJ Rubin, P Sollich J. Chem. Phys. 153, 025101, 2020 | 1 | 2020 |

Modeling antigen presentation and immune recognition with Restricted Boltzmann Machines B Bravi, S Cocco, R Monasson, T Mora, A Walczak Bulletin of the American Physical Society 66, 2021 | | 2021 |

Il sistema immunitario attraverso la lente dell’inferenza statistica B Bravi Ithaca: Viaggio nella Scienza, 55-71, 2021 | | 2021 |