Simion Paul
Simion Paul
ECOBIO UMR 6553, Université de Rennes 1
Verified email at - Homepage
Cited by
Cited by
A large and consistent phylogenomic dataset supports sponges as the sister group to all other animals
P Simion, H Philippe, D Baurain, M Jager, DJ Richter, A Di Franco, ...
Current Biology 27 (7), 958-967, 2017
A phylogenomic framework and timescale for comparative studies of tunicates
F Delsuc, H Philippe, G Tsagkogeorga, P Simion, MK Tilak, X Turon, ...
BMC Biology 16 (1), 39, 2018
ANISEED 2017: extending the integrated ascidian database to the exploration and evolutionary comparison of genome-scale datasets
M Brozovic, C Dantec, J Dardaillon, D Dauga, E Faure, M Gineste, ...
Nucleic acids research 46 (D1), D718-D725, 2018
A software tool ‘CroCo’detects pervasive cross-species contamination in next generation sequencing data
P Simion, K Belkhir, C François, J Veyssier, JC Rink, M Manuel, ...
BMC biology 16, 1-9, 2018
ANISEED 2015: a digital framework for the comparative developmental biology of ascidians
M Brozovic, C Martin, C Dantec, D Dauga, M Mendez, P Simion, ...
Nucleic acids research 44 (D1), D808-D818, 2016
Is adaptation limited by mutation? A timescale-dependent effect of genetic diversity on the adaptive substitution rate in animals
M Rousselle, P Simion, MK Tilak, E Figuet, B Nabholz, N Galtier
PLOS Genetics 16 (4), e1008668, 2020
To What Extent Current Limits of Phylogenomics Can Be Overcome?
P Simion, F Delsuc, H Philippe
Phylogenetics in the Genomic Era, 2.1: 1--2.1: 34, 2020
Chromosome-level genome assembly reveals homologous chromosomes and recombination in asexual rotifer Adineta vaga
P Simion, J Narayan, A Houtain, A Derzelle, L Baudry, E Nicolas, R Arora, ...
Science Advances 7 (41), eabg4216, 2021
ANISEED 2019: 4D exploration of genetic data for an extended range of tunicates
J Dardaillon, D Dauga, P Simion, E Faure, TA Onuma, MB DeBiasse, ...
Nucleic acids research 48 (D1), D668-D675, 2020
Exploring the potential of small RNA subunit and ITS sequences for resolving phylogenetic relationships within the phylum Ctenophora
P Simion, N Bekkouche, M Jager, E Quéinnec, M Manuel
Zoology 118 (2), 102-114, 2015
Convergent Acquisition of Nonembryonic Development in Styelid Ascidians
A Alié, LS Hiebert, P Simion, M Scelzo, MM Prünster, S Lotito, F Delsuc, ...
Molecular biology and evolution 35 (7), 1728-1743, 2018
Convergent consequences of parthenogenesis on stick insect genomes
KS Jaron, DJ Parker, Y Anselmetti, P Tran Van, J Bast, Z Dumas, E Figuet, ...
Science advances 8 (8), eabg3842, 2022
Skeletal Mineralization in Association with Type X Collagen Expression Is an Ancestral Feature for Jawed Vertebrates
M Debiais-Thibaud, P Simion, S Ventéo, D Muñoz, S Marcellini, S Mazan, ...
Molecular biology and evolution 36 (10), 2265-2276, 2019
Haplotype divergence supports long-term asexuality in the oribatid mite Oppiella nova
A Brandt, P Tran Van, C Bluhm, Y Anselmetti, Z Dumas, E Figuet, ...
Proceedings of the National Academy of Sciences 118 (38), e2101485118, 2021
Evolution of dental tissue mineralization: an analysis of the jawed vertebrate SPARC and SPARC-L families
S Enault, D Muñoz, P Simion, S Ventéo, JY Sire, S Marcellini, ...
BMC Evolutionary Biology 18, 1-12, 2018
A phylogenetic framework of the legume genus Aeschynomene for comparative genetic analysis of the Nod-dependent and Nod-independent symbioses
L Brottier, C Chaintreuil, P Simion, C Scornavacca, R Rivallan, P Mournet, ...
BMC plant biology 18, 1-15, 2018
First annotated draft genomes of nonmarine ostracods (Ostracoda, Crustacea) with different reproductive modes
P Tran Van, Y Anselmetti, J Bast, Z Dumas, N Galtier, KS Jaron, K Martens, ...
G3 11 (4), jkab043, 2021
Horizontal acquisition of a DNA ligase improves DNA damage tolerance in eukaryotes
E Nicolas, P Simion, M Guérineau, M Terwagne, M Colinet, J Virgo, ...
Nature Communications 14 (1), 7638, 2023
Les cténophores: de leur position dans l'arbre des métazoaires (approche phylogénomique) à leur diversité taxonomique (phylogénie moléculaire et anatomie comparée)
P Simion
Université Pierre et Marie Curie-Paris VI, 2014
D Erpenbeck, S Paul, M Manuel, P Cartwright, O Voigt, G Wörheide
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