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Naoki SHIGI
Naoki SHIGI
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Mechanistic insights into sulfur relay by multiple sulfur mediators involved in thiouridine biosynthesis at tRNA wobble positions
Y Ikeuchi, N Shigi, J Kato, A Nishimura, T Suzuki
Molecular cell 21 (1), 97-108, 2006
3112006
Biosynthesis and functions of sulfur modifications in tRNA
N Shigi
Frontiers in genetics 5, 81975, 2014
952014
Identification of two tRNA thiolation genes required for cell growth at extremely high temperatures
N Shigi, Y Sakaguchi, T Suzuki, K Watanabe
Journal of Biological Chemistry 281 (20), 14296-14306, 2006
872006
Temperature-dependent biosynthesis of 2-thioribothymidine of Thermus thermophilus tRNA
N Shigi, T Suzuki, T Terada, M Shirouzu, S Yokoyama, K Watanabe
Journal of Biological Chemistry 281 (4), 2104-2113, 2006
842006
Common thiolation mechanism in the biosynthesis of tRNA thiouridine and sulphur‐containing cofactors
N Shigi, Y Sakaguchi, S Asai, T Suzuki, K Watanabe
The EMBO journal 27 (24), 3267-3278, 2008
672008
Conserved bases in the TΨC loop of tRNA are determinants for thermophile-specific 2-thiouridylation at position 54
N Shigi, T Suzuki, M Tamakoshi, T Oshima, K Watanabe
Journal of Biological Chemistry 277 (42), 39128-39135, 2002
582002
Posttranslational modification of cellular proteins by a ubiquitin-like protein in bacteria
N Shigi
Journal of Biological Chemistry 287 (21), 17568-17577, 2012
502012
Biochemical and structural characterization of oxygen-sensitive 2-thiouridine synthesis catalyzed by an iron-sulfur protein TtuA
M Chen, S Asai, S Narai, S Nambu, N Omura, Y Sakaguchi, T Suzuki, ...
Proceedings of the National Academy of Sciences 114 (19), 4954-4959, 2017
412017
Recent advances in our understanding of the biosynthesis of sulfur modifications in tRNAs
N Shigi
Frontiers in Microbiology 9, 417939, 2018
392018
Crystallographic and mutational studies on the tRNA thiouridine synthetase TtuA
H Nakagawa, M Kuratani, S Goto‐Ito, T Ito, K Katsura, T Terada, ...
Proteins: Structure, Function, and Bioinformatics 81 (7), 1232-1244, 2013
342013
Substrate tRNA recognition mechanism of eubacterial tRNA (m1A58) methyltransferase (TrmI)
H Takuma, N Ushio, M Minoji, A Kazayama, N Shigi, A Hirata, ...
Journal of Biological Chemistry 290 (9), 5912-5925, 2015
322015
Taurine-containing uridine modifications in tRNA anticodons are required to decipher non-universal genetic codes in ascidian mitochondria
T Suzuki, K Miyauchi, T Suzuki, S Yokobori, N Shigi, A Kondow, ...
Journal of Biological Chemistry 286 (41), 35494-35498, 2011
242011
Folate‐/FAD‐dependent tRNA methyltransferase from Thermus thermophilus regulates other modifications in tRNA at low temperatures
R Yamagami, C Tomikawa, N Shigi, A Kazayama, S Asai, H Takuma, ...
Genes to Cells 21 (7), 740-754, 2016
222016
The [4Fe-4S] cluster of sulfurtransferase TtuA desulfurizes TtuB during tRNA modification in Thermus thermophilus
M Chen, M Ishizaka, S Narai, M Horitani, N Shigi, M Yao, Y Tanaka
Communications biology 3 (1), 168, 2020
212020
An ancient type of MnmA protein is an iron–sulfur cluster-dependent sulfurtransferase for tRNA anticodons
N Shigi, M Horitani, K Miyauchi, T Suzuki, M Kuroki
RNA 26 (3), 240-250, 2020
192020
Identification of a rhodanese‐like protein involved in thiouridine biosynthesis in Thermus thermophilus tRNA
N Shigi, S Asai, K Watanabe
FEBS letters 590 (24), 4628-4637, 2016
182016
Biosynthesis and Degradation of Sulfur Modifications in tRNAs
N Shigi
International Journal of Molecular Sciences 22 (21), 11937, 2021
162021
Biogenesis and Functions of Thio-Compounds in transfer RNA: Comparison of bacterial and eukaryotic thiolation machineries
鈴木勉
DNA and RNA modification enzymes (Book LANDES)(ed Grosjean, H.), 392-405, 2009
142009
Crystallographic study of the 2-thioribothymidine-synthetic complex TtuA–TtuB from Thermus thermophilus
M Chen, S Narai, N Omura, N Shigi, S Chimnaronk, Y Tanaka, M Yao
Acta Crystallographica Section F: Structural Biology Communications 72 (10 …, 2016
72016
Sulfur modifications in tRNA: function and implications for human disease
N Shigi
Modified Nucleic Acids in Biology and Medicine, 55-71, 2016
42016
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