| Detection of gene communities in multi-networks reveals cancer drivers L Cantini, E Medico, S Fortunato, M Caselle Scientific reports 5 (1), 17386, 2015 | 118 | 2015 |
| Benchmarking joint multi-omics dimensionality reduction approaches for the study of cancer L Cantini, P Zakeri, C Hernandez, A Naldi, D Thieffry, E Remy, A Baudot Nature communications 12 (1), 124, 2021 | 115 | 2021 |
| Independent component analysis for unraveling the complexity of cancer omics datasets N Sompairac, PV Nazarov, U Czerwinska, L Cantini, A Biton, A Molkenov, ... International Journal of molecular sciences 20 (18), 4414, 2019 | 88 | 2019 |
| MicroRNA–mRNA interactions underlying colorectal cancer molecular subtypes L Cantini, C Isella, C Petti, G Picco, S Chiola, E Ficarra, M Caselle, ... Nature communications 6 (1), 8878, 2015 | 82 | 2015 |
| Identification of microRNA clusters cooperatively acting on epithelial to mesenchymal transition in triple negative breast cancer L Cantini, G Bertoli, C Cava, T Dubois, A Zinovyev, M Caselle, ... Nucleic acids research 47 (5), 2205-2215, 2019 | 74 | 2019 |
| Interpreting pathways to discover cancer driver genes with Moonlight A Colaprico, C Olsen, MH Bailey, GJ Odom, T Terkelsen, TC Silva, ... Nature communications 11 (1), 69, 2020 | 72 | 2020 |
| Determining the optimal number of independent components for reproducible transcriptomic data analysis U Kairov, L Cantini, A Greco, A Molkenov, U Czerwinska, E Barillot, ... BMC genomics 18 (1), 1-13, 2017 | 65 | 2017 |
| Classification of gene signatures for their information value and functional redundancy L Cantini, L Calzone, L Martignetti, M Rydenfelt, N Blüthgen, E Barillot, ... NPJ systems biology and applications 4 (1), 2, 2017 | 58 | 2017 |
| Optimal transport improves cell–cell similarity inference in single-cell omics data GJ Huizing, G Peyré, L Cantini Bioinformatics 38 (8), 2169-2177, 2022 | 26 | 2022 |
| Evaluating the reproducibility of single-cell gene regulatory network inference algorithms Y Kang, D Thieffry, L Cantini Frontiers in genetics 12, 362, 2021 | 25 | 2021 |
| Assessing reproducibility of matrix factorization methods in independent transcriptomes L Cantini, U Kairov, A De Reynies, E Barillot, F Radvanyi, A Zinovyev Bioinformatics 35 (21), 4307-4313, 2019 | 25* | 2019 |
| Hope4Genes: a Hopfield-like class prediction algorithm for transcriptomic data L Cantini, M Caselle Scientific reports 9 (1), 337, 2019 | 18 | 2019 |
| A review of computational approaches detecting microRNAs involved in cancer L Cantini, M Caselle, A Forget, A Zinovyev, E Barillot, L Martignetti Frontiers in Bioscience 22, 1774-1791, 2017 | 18 | 2017 |
| Molecular inverse comorbidity between Alzheimer’s disease and lung cancer: New insights from matrix factorization A Greco, J Sanchez Valle, V Pancaldi, A Baudot, E Barillot, M Caselle, ... International Journal of Molecular Sciences 20 (13), 3114, 2019 | 15 | 2019 |
| Stochastic amplification of spatial modes in a system with one diffusing species L Cantini, C Cianci, D Fanelli, E Massi, L Barletti, M Asllani Journal of mathematical biology 69, 1585-1608, 2014 | 15 | 2014 |
| Investigating the epi-miRNome: Identification of epi-miRNAs using transfection experiments E Reale, D Taverna, L Cantini, L Martignetti, M Osella, C De Pittà, F Virga, ... Epigenomics 11 (14), 1581-1599, 2019 | 12 | 2019 |
| Linear noise approximation for stochastic oscillations of intracellular calcium L Cantini, C Cianci, D Fanelli, E Massi, L Barletti Journal of Theoretical Biology 349, 92-99, 2014 | 10 | 2014 |
| An integrated analysis of miRNA and gene expression changes in response to an obesogenic diet to explore the impact of transgenerational supplementation with Omega 3 fatty acids KF Corral-Jara, L Cantini, N Poupin, T Ye, JP Rigaudière, SDS Vincent, ... Nutrients 12 (12), 3864, 2020 | 5 | 2020 |
| Unsupervised ground metric learning using wasserstein singular vectors GJ Huizing, L Cantini, G Peyré International Conference on Machine Learning, 9429-9443, 2022 | 4 | 2022 |
| Application of independent component analysis to tumor transcriptomes reveals specific and reproducible immune-related signals U Czerwinska, L Cantini, U Kairov, E Barillot, A Zinovyev International Conference on Latent Variable Analysis and Signal Separation …, 2018 | 4 | 2018 |
Andrei ZinovyevIn silico R&D Evotec, Institut Curie, PRAIRIEVerified email at evotec.com
