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Zhibin Ning
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Year
Acetylation of metabolic enzymes coordinates carbon source utilization and metabolic flux
Q Wang, Y Zhang, C Yang, H Xiong, Y Lin, J Yao, H Li, L Xie, W Zhao, ...
Science 327 (5968), 1004-1007, 2010
11122010
MicroRNA, mRNA, and protein expression link development and aging in human and macaque brain
M Somel, S Guo, N Fu, Z Yan, HY Hu, Y Xu, Y Yuan, Z Ning, Y Hu, ...
Genome research 20 (9), 1207-1218, 2010
3442010
Widespread splicing changes in human brain development and aging
P Mazin, J Xiong, X Liu, Z Yan, X Zhang, M Li, L He, M Somel, Y Yuan, ...
Molecular systems biology 9 (1), 633, 2013
2342013
Metaproteomics reveals associations between microbiome and intestinal extracellular vesicle proteins in pediatric inflammatory bowel disease
X Zhang, SA Deeke, Z Ning, AE Starr, J Butcher, J Li, J Mayne, K Cheng, ...
Nature communications 9 (1), 2873, 2018
2252018
MetaPro-IQ: a universal metaproteomic approach to studying human and mouse gut microbiota
X Zhang, Z Ning, J Mayne, JI Moore, J Li, J Butcher, SA Deeke, R Chen, ...
Microbiome 4, 1-12, 2016
1642016
Effect of Peptide-to-TiO2 Beads Ratio on Phosphopeptide Enrichment Selectivity
Q Li, Z Ning, J Tang, S Nie, R Zeng
Journal of proteome research 8 (11), 5375-5381, 2009
1432009
MetaLab: an automated pipeline for metaproteomic data analysis
K Cheng, Z Ning, X Zhang, L Li, B Liao, J Mayne, A Stintzi, D Figeys
Microbiome 5, 1-10, 2017
1102017
Rapid metabolic evolution in human prefrontal cortex
X Fu, P Giavalisco, X Liu, G Catchpole, N Fu, ZB Ning, S Guo, Z Yan, ...
Proceedings of the National Academy of Sciences 108 (15), 6181-6186, 2011
1052011
Assessing the impact of protein extraction methods for human gut metaproteomics
X Zhang, L Li, J Mayne, Z Ning, A Stintzi, D Figeys
Journal of proteomics 180, 120-127, 2018
1002018
An in vitro model maintaining taxon-specific functional activities of the gut microbiome
L Li, E Abou-Samra, Z Ning, X Zhang, J Mayne, J Wang, K Cheng, ...
Nature communications 10 (1), 4146, 2019
902019
Proteomic analysis of ascending colon biopsies from a paediatric inflammatory bowel disease inception cohort identifies protein biomarkers that differentiate Crohn's disease …
AE Starr, SA Deeke, Z Ning, CK Chiang, X Zhang, W Mottawea, ...
Gut 66 (9), 1573-1583, 2017
842017
High-coverage proteome analysis reveals the first insight of protein modification systems in the pathogenic spirochete Leptospira interrogans
XJ Cao, J Dai, H Xu, S Nie, X Chang, BY Hu, QH Sheng, LS Wang, ...
Cell research 20 (2), 197-210, 2010
822010
Bottom-up proteomics (2013–2015): keeping up in the era of systems biology
J Mayne, Z Ning, X Zhang, AE Starr, R Chen, S Deeke, CK Chiang, B Xu, ...
Analytical chemistry 88 (1), 95-121, 2016
782016
Deep metaproteomics approach for the study of human microbiomes
X Zhang, W Chen, Z Ning, J Mayne, D Mack, A Stintzi, R Tian, D Figeys
Analytical chemistry 89 (17), 9407-9415, 2017
762017
Quantitative site-specific ADP-ribosylation profiling of DNA-dependent PARPs
JP Gagné, C Ethier, D Defoy, S Bourassa, MF Langelier, AA Riccio, ...
DNA repair 30, 68-79, 2015
722015
Transcript and protein expression decoupling reveals RNA binding proteins and miRNAs as potential modulators of human aging
YN Wei, HY Hu, GC Xie, N Fu, ZB Ning, R Zeng, P Khaitovich
Genome biology 16, 1-15, 2015
712015
The proteomic landscape of the suprachiasmatic nucleus clock reveals large-scale coordination of key biological processes
CK Chiang, N Mehta, A Patel, P Zhang, Z Ning, J Mayne, WYL Sun, ...
PLoS genetics 10 (10), e1004695, 2014
712014
RapidAIM: a culture-and metaproteomics-based Rapid Assay of Individual Microbiome responses to drugs
L Li, Z Ning, X Zhang, J Mayne, K Cheng, A Stintzi, D Figeys
Microbiome 8, 1-16, 2020
652020
Evaluating in vitro culture medium of gut microbiome with orthogonal experimental design and a metaproteomics approach
L Li, X Zhang, Z Ning, J Mayne, JI Moore, J Butcher, CK Chiang, D Mack, ...
Journal of proteome research 17 (1), 154-163, 2018
532018
Comprehensive profiling of phosphopeptides based on anion exchange followed by flow-through enrichment with titanium dioxide (AFET)
S Nie, J Dai, ZB Ning, XJ Cao, QH Sheng, R Zeng
Journal of proteome research 9 (9), 4585-4594, 2010
532010
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