Directed evolution of a recombinase that excises the provirus of most HIV-1 primary isolates with high specificity J Karpinski, I Hauber, J Chemnitz, C Schäfer, M Paszkowski-Rogacz, ... Nature biotechnology 34 (4), 401-409, 2016 | 161 | 2016 |
Rapid and accurate nucleobase detection using FnCas9 and its application in COVID-19 diagnosis M Azhar, R Phutela, M Kumar, AH Ansari, R Rauthan, S Gulati, N Sharma, ... Biosensors and Bioelectronics 183, 113207, 2021 | 116 | 2021 |
Francisella novicida Cas9 interrogates genomic DNA with very high specificity and can be used for mammalian genome editing S Acharya, A Mishra, D Paul, AH Ansari, M Azhar, M Kumar, R Rauthan, ... Proceedings of the National Academy of Sciences 116 (42), 20959-20968, 2019 | 83 | 2019 |
Combined RNAi and localization for functionally dissecting long noncoding RNAs D Chakraborty, D Kappei, M Theis, A Nitzsche, L Ding, ... Nature methods 9 (4), 360-362, 2012 | 77 | 2012 |
Rapid, field-deployable nucleobase detection and identification using FnCas9 M Azhar, R Phutela, AH Ansari, D Sinha, N Sharma, M Kumar, M Aich, ... BioRxiv, 2020.04. 07.028167, 2020 | 65 | 2020 |
FnCas9-based CRISPR diagnostic for rapid and accurate detection of major SARS-CoV-2 variants on a paper strip M Kumar, S Gulati, AH Ansari, R Phutela, S Acharya, M Azhar, J Murthy, ... Elife 10, e67130, 2021 | 53 | 2021 |
Inactivation of cancer mutations utilizing CRISPR/Cas9 C Gebler, T Lohoff, M Paszkowski-Rogacz, J Mircetic, D Chakraborty, ... Journal of the National Cancer Institute 109 (1), djw183, 2017 | 48 | 2017 |
CRISPR/Cas9: a historical and chemical biology perspective of targeted genome engineering A Singh, D Chakraborty, S Maiti Chemical Society Reviews 45 (24), 6666-6684, 2016 | 43 | 2016 |
Rapid identification and tracking of SARS-CoV-2 variants of concern D Chakraborty, A Agrawal, S Maiti The Lancet 397 (10282), 1346-1347, 2021 | 36 | 2021 |
lncRNA Panct1 maintains mouse embryonic stem cell identity by regulating TOBF1 recruitment to Oct-Sox sequences in early G1 D Chakraborty, M Paszkowski-Rogacz, N Berger, L Ding, J Mircetic, J Fu, ... Cell reports 21 (11), 3012-3021, 2017 | 33 | 2017 |
Novel internal regulators and candidate miRNAs within miR-379/miR-656 miRNA cluster can alter cellular phenotype of human glioblastoma S Nayak, M Aich, A Kumar, S Sengupta, P Bajad, P Dhapola, D Paul, ... Scientific Reports 8 (1), 1-10, 2018 | 29 | 2018 |
Role of lncRNAs in stem cell maintenance and differentiation M Aich, D Chakraborty Current topics in developmental biology 138, 73-112, 2020 | 28 | 2020 |
A G-quadruplex motif at the 3′ end of sgRNAs improves CRISPR–Cas9 based genome editing efficiency S Nahar, P Sehgal, M Azhar, M Rai, A Singh, S Sivasubbu, D Chakraborty, ... Chemical communications 54 (19), 2377-2380, 2018 | 28 | 2018 |
Restoration of miRNA-149 expression by TmPyP4 induced unfolding of quadruplex within its precursor A Ghosh, MK Ekka, A Tawani, A Kumar, D Chakraborty, S Maiti Biochemistry 58 (6), 514-525, 2018 | 26 | 2018 |
The Paf1 complex positively regulates enhancer activity in mouse embryonic stem cells L Ding, M Paszkowski-Rogacz, J Mircetic, D Chakraborty, F Buchholz Life science alliance 4 (3), 2021 | 17 | 2021 |
Systems analyses reveal shared and diverse attributes of Oct4 regulation in pluripotent cells L Ding, M Paszkowski-Rogacz, M Winzi, D Chakraborty, M Theis, S Singh, ... Cell systems 1 (2), 141-151, 2015 | 17 | 2015 |
Terminal uridylyl transferase mediated site-directed access to clickable chromatin employing CRISPR-dCas9 JT George, M Azhar, M Aich, D Sinha, UB Ambi, S Maiti, D Chakraborty, ... Journal of the American Chemical Society 142 (32), 13954-13965, 2020 | 14 | 2020 |
Combinatorial role of two G-quadruplexes in 5′ UTR of transforming growth factor β2 (TGFβ2) P Agarwala, S Pandey, MK Ekka, D Chakraborty, S Maiti Biochimica et Biophysica Acta (BBA)-General Subjects 1863 (11), 129416, 2019 | 12 | 2019 |
Targeting human long noncoding transcripts by endoribonuclease-prepared siRNAs M Theis, M Paszkowski-Rogacz, I Weisswange, D Chakraborty, ... Journal of Biomolecular Screening 20 (8), 1018-1026, 2015 | 12 | 2015 |
Efficiency of chitosan-coated PLGA nanocarriers for cellular delivery of siRNA and CRISPR/Cas9 complex A Srivastav, K Gupta, D Chakraborty, P Dandekar, R Jain Journal of Pharmaceutical Innovation, 1-14, 2020 | 9 | 2020 |