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Efthymios Motakis
Efthymios Motakis
Computational Scientist, The Jackson Laboratory, Farmington, CT, USA
Adresse e-mail validée de jax.org - Page d'accueil
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Année
A promoter-level mammalian expression atlas
Fantom Consortium
Nature 507 (7493), 462, 2014
16932014
Redefinition of the human mast cell transcriptome by deep-CAGE sequencing
E Motakis, S Guhl, Y Ishizu, M Itoh, H Kawaji, M de Hoon, T Lassmann, ...
Blood, The Journal of the American Society of Hematology 123 (17), e58-e67, 2014
2102014
C1 CAGE detects transcription start sites and enhancer activity at single-cell resolution
T Kouno, J Moody, ATJ Kwon, Y Shibayama, S Kato, Y Huang, M Böttcher, ...
Nature communications 10 (1), 1-12, 2019
1152019
Data-driven approach to predict survival of cancer patients
E Motakis, AV Ivshina, VA Kuznetsov
IEEE Engineering in Medicine and Biology Magazine 28 (4), 58-66, 2009
612009
Prioritizing candidates of post–myocardial infarction heart failure using plasma proteomics and single-cell transcriptomics
MY Chan, M Efthymios, SH Tan, JW Pickering, R Troughton, C Pemberton, ...
Circulation 142 (15), 1408-1421, 2020
552020
Complex sense-antisense architecture of TNFAIP1/POLDIP2 on 17q11. 2 represents a novel transcriptional structural-functional gene module involved in breast cancer progression
OV Grinchuk, E Motakis, VA Kuznetsov
BMC genomics 11 (1), 1-21, 2010
502010
Variance stabilization and normalization for one-color microarray data using a data-driven multiscale approach
ES Motakis, GP Nason, P Fryzlewicz, GA Rutter
Bioinformatics 22 (20), 2547-2553, 2006
502006
Robust CTCF-Based Chromatin Architecture Underpins Epigenetic Changes in the Heart Failure Stress–Gene Response
DP Lee, WLW Tan, CG Anene-Nzelu, CJM Lee, PY Li, TDA Luu, CX Chan, ...
Circulation 139 (16), 1937-1956, 2019
462019
Transposon insertional mutagenesis in mice identifies human breast cancer susceptibility genes and signatures for stratification
L Chen, P Jenjaroenpun, AMC Pillai, AV Ivshina, GS Ow, M Efthimios, ...
Proceedings of the National Academy of Sciences 114 (11), E2215-E2224, 2017
442017
Impact of adenoviral transduction with SREBP1c or AMPK on pancreatic islet gene expression profile: analysis with oligonucleotide microarrays
F Diraison, E Motakis, LE Parton, GP Nason, I Leclerc, GA Rutter
Diabetes 53 (suppl 3), S84-S91, 2004
412004
Retinoic acid potentiates inflammatory cytokines in human mast cells: Identification of mast cells as prominent constituents of the skin retinoid network
M Babina, S Guhl, E Motakis, M Artuc, T Hazzan, M Worm, ARR Forrest, ...
Molecular and cellular endocrinology 406, 49-59, 2015
292015
A robust tool for discriminative analysis and feature selection in paired samples impacts the identification of the genes essential for reprogramming lung tissue to adenocarcinoma
SH Toh, P Prathipati, E Motakis, CK Kwoh, SP Yenamandra, ...
BMC genomics 12 (3), 1-24, 2011
232011
Sense-antisense gene-pairs in breast cancer and associated pathological pathways
OV Grinchuk, E Motakis, SP Yenamandra, GS Ow, P Jenjaroenpun, ...
Oncotarget 6 (39), 42197, 2015
202015
A pragmatic randomised controlled trial of preferred intensity exercise in depressed adult women in the United Kingdom: secondary analysis of individual variability of depression
ID Morres, A Hinton-Bayre, E Motakis, T Carter, P Callaghan
BMC public health 19 (1), 1-11, 2019
152019
Mast cell transcriptome elucidation: what are the implications for allergic disease in the clinic and where do we go next?
M Babina, E Motakis, T Zuberbier
Expert review of clinical immunology 10 (8), 977-980, 2014
102014
Genome-scale identification of survival significant genes and gene pairs
E Motakis, VA Kuznetsov
Proceedings of the World Congress on Engineering and Computer Science 1, 2009
72009
Dimethyl sulfoxide (DMSO) enhances direct cardiac reprogramming by inhibiting the bromodomain of coactivators CBP/p300
CK Lim, M Efthymios, W Tan, MI Autio, Z Tiang, PY Li, RSY Foo
Journal of Molecular and Cellular Cardiology, 2021
62021
Sense-antisense gene pairs for patient stratification, prognosis, and therapeutic biomarkers identification
O Grinchuk, E Motakis, SP Yenamandra, VA Kuznetsov
62015
Macrostate identification from biomolecular simulations through time series analysis
W Zhou, E Motakis, G Fuentes, CS Verma
Journal of chemical information and modeling 52 (9), 2319-2324, 2012
52012
Data-driven approach to predict survival of cancer patients
V Kuznetsov, E Motakis, A Ivshina
IEEE Engineering in Medicine and Biology Magazine 28 (4), 58-66, 2009
52009
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