John Matese
John Matese
Bioinformatics, Princeton University
Verified email at Princeton.EDU
Title
Cited by
Cited by
Year
Gene ontology: tool for the unification of biology
M Ashburner, CA Ball, JA Blake, D Botstein, H Butler, JM Cherry, ...
Nature genetics 25 (1), 25-29, 2000
29494*2000
Gene expression patterns of breast carcinomas distinguish tumor subclasses with clinical implications
T Sørlie, CM Perou, R Tibshirani, T Aas, S Geisler, H Johnsen, T Hastie, ...
Proceedings of the National Academy of Sciences 98 (19), 10869-10874, 2001
110532001
Minimum information about a microarray experiment (MIAME)—toward standards for microarray data
A Brazma, P Hingamp, J Quackenbush, G Sherlock, P Spellman, ...
Nature genetics 29 (4), 365, 2001
44002001
Identification of genes periodically expressed in the human cell cycle and their expression in tumors
ML Whitfield, G Sherlock, AJ Saldanha, JI Murray, CA Ball, KE Alexander, ...
Molecular biology of the cell 13 (6), 1977-2000, 2002
15062002
Saccharomyces Genome Database: the genomics resource of budding yeast
JM Cherry, EL Hong, C Amundsen, R Balakrishnan, G Binkley, ET Chan, ...
Nucleic acids research 40 (D1), D700-D705, 2012
13412012
The stanford microarray database
G Sherlock, T Hernandez-Boussard, A Kasarskis, G Binkley, JC Matese, ...
Nucleic acids research 29 (1), 152-155, 2001
5532001
SOURCE: a unified genomic resource of functional annotations, ontologies, and gene expression data
M Diehn, G Sherlock, G Binkley, H Jin, JC Matese, ...
Nucleic acids research 31 (1), 219-223, 2003
5022003
Coordination of growth rate, cell cycle, stress response, and metabolic activity in yeast
MJ Brauer, C Huttenhower, EM Airoldi, R Rosenstein, JC Matese, ...
Molecular biology of the cell 19 (1), 352-367, 2008
5012008
The Stanford Microarray Database: data access and quality assessment tools
J Gollub, CA Ball, G Binkley, J Demeter, DB Finkelstein, JM Hebert, ...
Nucleic acids research 31 (1), 94-96, 2003
4052003
The Stanford Microarray Database accommodates additional microarray platforms and data formats
CA Ball, IAB Awad, J Demeter, J Gollub, JM Hebert, ...
Nucleic Acids Research 33 (suppl_1), D580-D582, 2005
2332005
Transcriptional programs activated by exposure of human prostate cancer cells to androgen
SE DePrimo, M Diehn, JB Nelson, RE Reiter, J Matese, M Fero, ...
Genome biology 3 (7), research0032. 1, 2002
2282002
Gene ontology: tool for the unification of biology. The Gene Ontology Consortium
AP Davis, K Dolinski, SS Dwight, JT Eppig, MA Harris, DP Hill, ...
Nat Genet 25 (1), 2529, 2000
2192000
The Stanford Microarray Database: implementation of new analysis tools and open source release of software
J Demeter, C Beauheim, J Gollub, T Hernandez-Boussard, H Jin, D Maier, ...
Nucleic acids research 35 (suppl_1), D766-D770, 2007
2102007
The Oxytricha trifallax macronuclear genome: a complex eukaryotic genome with 16,000 tiny chromosomes
EC Swart, JR Bracht, V Magrini, P Minx, X Chen, Y Zhou, JS Khurana, ...
PLoS biology 11 (1), 2013
1552013
Submission of microarray data to public repositories
CA Ball, A Brazma, H Causton, S Chervitz, R Edgar, P Hingamp, ...
PLoS biology 2 (9), 2004
1432004
Saccharomyces genome database
JM Cherry, C Ball, K Dolinski, S Dwight, M Harris, JC Matese, G Sherlock, ...
832001
Saccharomyces Genome Database provides tools to survey gene expression and functional analysis data
CA Ball, H Jin, G Sherlock, S Weng, JC Matese, R Andrada, G Binkley, ...
Nucleic acids research 29 (1), 80-81, 2001
732001
Comparative genomic hybridizations of Entamoeba strains reveal unique genetic fingerprints that correlate with virulence
PH Shah, RC MacFarlane, D Bhattacharya, JC Matese, J Demeter, ...
Eukaryotic Cell 4 (3), 504-515, 2005
632005
Sex, flies and microarrays
GA Churchill, B Oliver
Nature genetics 29 (4), 355-356, 2001
632001
Regulated exocytosis and sequential construction of the extracellular matrix surrounding the sea urchin zygote
JC Matese, S Black, DR McClay
Developmental biology 186 (1), 16-26, 1997
531997
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Articles 1–20