Carl Nettelblad
Carl Nettelblad
Associate Professor, Scientific Computing, Uppsala University
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Three-dimensional reconstruction of the giant mimivirus particle with an x-ray free-electron laser
T Ekeberg, M Svenda, C Abergel, FRNC Maia, V Seltzer, JM Claverie, ...
Physical review letters 114 (9), 098102, 2015
Coherent diffraction of single Rice Dwarf virus particles using hard X-rays at the Linac Coherent Light Source
A Munke, J Andreasson, A Aquila, S Awel, K Ayyer, A Barty, RJ Bean, ...
Scientific data 3 (1), 1-12, 2016
Correlations in scattered X-ray laser pulses reveal nanoscale structural features of viruses
RP Kurta, JJ Donatelli, CH Yoon, P Berntsen, J Bielecki, BJ Daurer, ...
Physical review letters 119 (15), 158102, 2017
The presence and impact of reference bias on population genomic studies of prehistoric human populations
T Günther, C Nettelblad
PLoS genetics 15 (7), e1008302, 2019
Experimental strategies for imaging bioparticles with femtosecond hard X-ray pulses
BJ Daurer, K Okamoto, J Bielecki, FRNC Maia, K Mühlig, MM Seibert, ...
IUCrJ 4 (3), 251-262, 2017
Coherent soft X-ray diffraction imaging of coliphage PR772 at the Linac coherent light source
HKN Reddy, CH Yoon, A Aquila, S Awel, K Ayyer, A Barty, P Berntsen, ...
Scientific data 4 (1), 1-9, 2017
Hummingbird: monitoring and analyzing flash X-ray imaging experiments in real time
BJ Daurer, MF Hantke, C Nettelblad, FRNC Maia
Journal of applied crystallography 49 (3), 1042-1047, 2016
Femtosecond X-ray Fourier holography imaging of free-flying nanoparticles
T Gorkhover, A Ulmer, K Ferguson, M Bucher, FRNC Maia, J Bielecki, ...
Nature Photonics 12 (3), 150-153, 2018
Electrospray sample injection for single-particle imaging with x-ray lasers
J Bielecki, MF Hantke, BJ Daurer, HKN Reddy, D Hasse, DSD Larsson, ...
Science advances 5 (5), eaav8801, 2019
A hybrid method for the imputation of genomic data in livestock populations
R Antolín, C Nettelblad, G Gorjanc, D Money, JM Hickey
Genetics Selection Evolution 49 (1), 1-17, 2017
Considerations for three-dimensional image reconstruction from experimental data in coherent diffractive imaging
IV Lundholm, JA Sellberg, T Ekeberg, MF Hantke, K Okamoto, ...
IUCrJ 5 (5), 531-541, 2018
Imputation of single nucleotide polymorphism genotypes in biparental, backcross, and topcross populations with a hidden Markov model
JM Hickey, G Gorjanc, RK Varshney, C Nettelblad
Crop Science 55, 1-13, 2015
cnF2freq: efficient determination of genotype and haplotype probabilities in outbred populations using Markov models
C Nettelblad, S Holmgren, L Crooks, Ö Carlborg
International Conference on Bioinformatics and Computational Biology, 307-319, 2009
An improved method for estimating chromosomal line origin in QTL analysis of crosses between outbred lines
L Crooks, C Nettelblad, Ö Carlborg
G3: Genes| Genomes| Genetics 1 (1), 57-64, 2011
Inferring haplotypes and parental genotypes in larger full sib-ships and other pedigrees with missing or erroneous genotype data
C Nettelblad
BMC genetics 13 (1), 1-13, 2012
MAPfastR: quantitative trait loci mapping in outbred line crosses
RM Nelson, C Nettelblad, ME Pettersson, X Shen, L Crooks, F Besnier, ...
G3: Genes, Genomes, Genetics 3 (12), 2147-2149, 2013
Artifact reduction in the CSPAD detectors used for LCLS experiments
A Pietrini, C Nettelblad
Journal of synchrotron radiation 24 (5), 1092-1097, 2017
BAMSI: a multi-cloud service for scalable distributed filtering of massive genome data
K Ausmees, A John, SZ Toor, A Hellander, C Nettelblad
BMC bioinformatics 19 (1), 1-11, 2018
Assessing uncertainties in X-ray single-particle three-dimensional reconstruction
J Liu, S Engblom, C Nettelblad
Physical Review E 98 (1), 013303, 2018
Haplotype inference based on Hidden Markov Models in the QTL-MAS 2010 multi-generational dataset
C Nettelblad
BMC proceedings 5 (3), 1-7, 2011
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