Axel Cournac
Axel Cournac
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Multiscale structuring of the E. coli chromosome by nucleoid-associated and condensin proteins
VS Lioy, A Cournac, M Marbouty, S Duigou, J Mozziconacci, O Espéli, ...
Cell 172 (4), 771-783. e18, 2018
3D genome reconstruction from chromosomal contacts
A Lesne, J Riposo, P Roger, A Cournac, J Mozziconacci
Nature methods 11 (11), 1141-1143, 2014
Condensin-and replication-mediated bacterial chromosome folding and origin condensation revealed by Hi-C and super-resolution imaging
M Marbouty, A Le Gall, DI Cattoni, A Cournac, A Koh, JB Fiche, ...
Molecular cell 59 (4), 588-602, 2015
Normalization of a chromosomal contact map
A Cournac, H Marie-Nelly, M Marbouty, R Koszul, J Mozziconacci
BMC genomics 13, 1-13, 2012
Metagenomic chromosome conformation capture (meta3C) unveils the diversity of chromosome organization in microorganisms
M Marbouty, A Cournac, JF Flot, H Marie-Nelly, J Mozziconacci, R Koszul
elife 3, e03318, 2014
High-quality genome (re) assembly using chromosomal contact data
H Marie-Nelly, M Marbouty, A Cournac, JF Flot, G Liti, DP Parodi, S Syan, ...
Nature communications 5 (1), 5695, 2014
Scaffolding bacterial genomes and probing host-virus interactions in gut microbiome by proximity ligation (chromosome capture) assay
M Marbouty, L Baudry, A Cournac, R Koszul
Science advances 3 (2), e1602105, 2017
The 3D folding of metazoan genomes correlates with the association of similar repetitive elements
A Cournac, R Koszul, J Mozziconacci
Nucleic acids research 44 (1), 245-255, 2016
DNA looping in prokaryotes: experimental and theoretical approaches
A Cournac, J Plumbridge
Journal of bacteriology 195 (6), 1109-1119, 2013
Spatial reorganization of telomeres in long-lived quiescent cells
M Guidi, M Ruault, M Marbouty, I Loïodice, A Cournac, C Billaudeau, ...
Genome biology 16, 1-15, 2015
Regulation of cohesin-mediated chromosome folding by Eco1 and other partners
L Dauban, R Montagne, A Thierry, L Lazar-Stefanita, N Bastié, O Gadal, ...
Molecular cell 77 (6), 1279-1293. e4, 2020
Evidence for a dual role of actin in regulating chromosome organization and dynamics in yeast
M Spichal, A Brion, S Herbert, A Cournac, M Marbouty, C Zimmer, ...
Journal of cell science 129 (4), 681-692, 2016
Computer vision for pattern detection in chromosome contact maps
C Matthey-Doret, L Baudry, A Breuer, R Montagne, N Guiglielmoni, ...
Nature communications 11 (1), 5795, 2020
Tridimensional infiltration of DNA viruses into the host genome shows preferential contact with active chromatin
P Moreau, A Cournac, GA Palumbo, M Marbouty, S Mortaza, A Thierry, ...
Nature communications 9 (1), 4268, 2018
Electrostatics of DNA compaction in viruses, bacteria and eukaryotes: functional insights and evolutionary perspective
P Carrivain, A Cournac, C Lavelle, A Lesne, J Mozziconacci, F Paillusson, ...
Soft Matter 8 (36), 9285-9301, 2012
FACT mediates cohesin function on chromatin
J Garcia-Luis, L Lazar-Stefanita, P Gutierrez-Escribano, A Thierry, ...
Nature structural & molecular biology 26 (10), 970-979, 2019
Filling annotation gaps in yeast genomes using genome-wide contact maps
H Marie-Nelly, M Marbouty, A Cournac, G Liti, G Fischer, C Zimmer, ...
Bioinformatics 30 (15), 2105-2113, 2014
Simple molecular networks that respond optimally to time-periodic stimulation
A Cournac, JA Sepulchre
BMC systems biology 3, 1-14, 2009
Genome-wide replication landscape of Candida glabrata
S Descorps-Declère, C Saguez, A Cournac, M Marbouty, T Rolland, L Ma, ...
BMC biology 13, 1-19, 2015
Generation and analysis of chromosomal contact maps of yeast species
A Cournac, M Marbouty, J Mozziconacci, R Koszul
Yeast functional genomics: methods and protocols, 227-245, 2016
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