The genomic basis of adaptive evolution in threespine sticklebacks FC Jones, MG Grabherr, YF Chan, P Russell, E Mauceli, J Johnson, ... Nature 484 (7392), 55-61, 2012 | 1555 | 2012 |
The genomic substrate for adaptive radiation in African cichlid fish D Brawand, CE Wagner, YI Li, M Malinsky, I Keller, S Fan, O Simakov, ... Nature 513 (7518), 375-381, 2014 | 824 | 2014 |
The genome of the green anole lizard and a comparative analysis with birds and mammals J Alföldi, F Di Palma, M Grabherr, C Williams, L Kong, E Mauceli, ... Nature 477 (7366), 587-591, 2011 | 607 | 2011 |
Broad host range of SARS-CoV-2 predicted by comparative and structural analysis of ACE2 in vertebrates J Damas, GM Hughes, KC Keough, CA Painter, NS Persky, M Corbo, ... Proceedings of the National Academy of Sciences 117 (36), 22311-22322, 2020 | 362 | 2020 |
An improved canine genome and a comprehensive catalogue of coding genes and non-coding transcripts MP Hoeppner, A Lundquist, M Pirun, JRS Meadows, N Zamani, ... PloS one 9 (3), e91172, 2014 | 209 | 2014 |
Genome-wide analyses implicate 33 loci in heritable dog osteosarcoma, including regulatory variants near CDKN2A/B EK Karlsson, S Sigurdsson, E Ivansson, R Thomas, I Elvers, J Wright, ... Genome biology 14 (12), 1-16, 2013 | 139 | 2013 |
The draft genome sequence of the ferret (Mustela putorius furo) facilitates study of human respiratory disease X Peng, J Alföldi, K Gori, AJ Eisfeld, SR Tyler, J Tisoncik-Go, D Brawand, ... Nature biotechnology 32 (12), 1250-1255, 2014 | 109 | 2014 |
Origins of shared genetic variation in African cichlids YHE Loh, E Bezault, FM Muenzel, RB Roberts, R Swofford, M Barluenga, ... Molecular biology and evolution 30 (4), 906-917, 2013 | 101 | 2013 |
Candidate genes and functional noncoding variants identified in a canine model of obsessive-compulsive disorder R Tang, HJ Noh, D Wang, S Sigurdsson, R Swofford, M Perloski, ... Genome biology 15 (3), 1-15, 2014 | 93 | 2014 |
Exome sequencing of lymphomas from three dog breeds reveals somatic mutation patterns reflecting genetic background I Elvers, J Turner-Maier, R Swofford, M Koltookian, J Johnson, C Stewart, ... Genome research 25 (11), 1634-1645, 2015 | 86 | 2015 |
A comparative genomics multitool for scientific discovery and conservation Zoonomia Consortium Nature 587 (7833), 240, 2020 | 72 | 2020 |
Genome-wide association study identifies shared risk loci common to two malignancies in golden retrievers N Tonomura, I Elvers, R Thomas, K Megquier, J Turner-Maier, C Howald, ... PLoS genetics 11 (2), e1004922, 2015 | 69 | 2015 |
SETD2 is recurrently mutated in whole-exome sequenced canine osteosarcoma S Sakthikumar, I Elvers, J Kim, ML Arendt, R Thomas, J Turner-Maier, ... Cancer research 78 (13), 3421-3431, 2018 | 52 | 2018 |
Integrating evolutionary and regulatory information with a multispecies approach implicates genes and pathways in obsessive-compulsive disorder HJ Noh, R Tang, J Flannick, C O’Dushlaine, R Swofford, D Howrigan, ... Nature communications 8 (1), 1-13, 2017 | 46 | 2017 |
A quantitative framework for characterizing the evolutionary history of mammalian gene expression J Chen, R Swofford, J Johnson, BB Cummings, N Rogel, K Lindblad-Toh, ... Genome research 29 (1), 53-63, 2019 | 45 | 2019 |
Broad Institute Genome Sequencing Platform & Whole Genome Assembly Team The genomic basis of adaptive evolution in threespine sticklebacks FC Jones, MG Grabherr, YF Chan, P Russell, E Mauceli, J Johnson, ... Nature 484 (7392), 55-61, 2012 | 44 | 2012 |
Comparative genomics reveals shared mutational landscape in canine hemangiosarcoma and human angiosarcoma K Megquier, J Turner-Maier, R Swofford, JH Kim, AL Sarver, C Wang, ... Molecular Cancer Research 17 (12), 2410-2421, 2019 | 42 | 2019 |
Variants within the SP110 nuclear body protein modify risk of canine degenerative myelopathy EL Ivansson, K Megquier, SV Kozyrev, E Murén, IB Körberg, R Swofford, ... Proceedings of the National Academy of Sciences 113 (22), E3091-E3100, 2016 | 31 | 2016 |
Exploiting nucleotide composition to engineer promoters MG Grabherr, J Pontiller, E Mauceli, W Ernst, M Baumann, T Biagi, ... PLoS One 6 (5), e20136, 2011 | 26 | 2011 |
An improved microRNA annotation of the canine genome L Penso-Dolfin, R Swofford, J Johnson, J Alföldi, K Lindblad-Toh, ... PloS one 11 (4), e0153453, 2016 | 22 | 2016 |