Ross Swofford
Ross Swofford
Senior Research Associate, Broad Institute
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The genomic basis of adaptive evolution in threespine sticklebacks
FC Jones, MG Grabherr, YF Chan, P Russell, E Mauceli, J Johnson, ...
Nature 484 (7392), 55-61, 2012
The genomic substrate for adaptive radiation in African cichlid fish
D Brawand, CE Wagner, YI Li, M Malinsky, I Keller, S Fan, O Simakov, ...
Nature 513 (7518), 375-381, 2014
The genome of the green anole lizard and a comparative analysis with birds and mammals
J Alföldi, F Di Palma, M Grabherr, C Williams, L Kong, E Mauceli, ...
Nature 477 (7366), 587-591, 2011
Broad host range of SARS-CoV-2 predicted by comparative and structural analysis of ACE2 in vertebrates
J Damas, GM Hughes, KC Keough, CA Painter, NS Persky, M Corbo, ...
Proceedings of the National Academy of Sciences 117 (36), 22311-22322, 2020
An improved canine genome and a comprehensive catalogue of coding genes and non-coding transcripts
MP Hoeppner, A Lundquist, M Pirun, JRS Meadows, N Zamani, ...
PloS one 9 (3), e91172, 2014
Genome-wide analyses implicate 33 loci in heritable dog osteosarcoma, including regulatory variants near CDKN2A/B
EK Karlsson, S Sigurdsson, E Ivansson, R Thomas, I Elvers, J Wright, ...
Genome biology 14 (12), 1-16, 2013
The draft genome sequence of the ferret (Mustela putorius furo) facilitates study of human respiratory disease
X Peng, J Alföldi, K Gori, AJ Eisfeld, SR Tyler, J Tisoncik-Go, D Brawand, ...
Nature biotechnology 32 (12), 1250-1255, 2014
Origins of shared genetic variation in African cichlids
YHE Loh, E Bezault, FM Muenzel, RB Roberts, R Swofford, M Barluenga, ...
Molecular biology and evolution 30 (4), 906-917, 2013
Candidate genes and functional noncoding variants identified in a canine model of obsessive-compulsive disorder
R Tang, HJ Noh, D Wang, S Sigurdsson, R Swofford, M Perloski, ...
Genome biology 15 (3), 1-15, 2014
Exome sequencing of lymphomas from three dog breeds reveals somatic mutation patterns reflecting genetic background
I Elvers, J Turner-Maier, R Swofford, M Koltookian, J Johnson, C Stewart, ...
Genome research 25 (11), 1634-1645, 2015
A comparative genomics multitool for scientific discovery and conservation
Zoonomia Consortium
Nature 587 (7833), 240, 2020
Genome-wide association study identifies shared risk loci common to two malignancies in golden retrievers
N Tonomura, I Elvers, R Thomas, K Megquier, J Turner-Maier, C Howald, ...
PLoS genetics 11 (2), e1004922, 2015
SETD2 is recurrently mutated in whole-exome sequenced canine osteosarcoma
S Sakthikumar, I Elvers, J Kim, ML Arendt, R Thomas, J Turner-Maier, ...
Cancer research 78 (13), 3421-3431, 2018
Integrating evolutionary and regulatory information with a multispecies approach implicates genes and pathways in obsessive-compulsive disorder
HJ Noh, R Tang, J Flannick, C O’Dushlaine, R Swofford, D Howrigan, ...
Nature communications 8 (1), 1-13, 2017
A quantitative framework for characterizing the evolutionary history of mammalian gene expression
J Chen, R Swofford, J Johnson, BB Cummings, N Rogel, K Lindblad-Toh, ...
Genome research 29 (1), 53-63, 2019
Broad Institute Genome Sequencing Platform & Whole Genome Assembly Team The genomic basis of adaptive evolution in threespine sticklebacks
FC Jones, MG Grabherr, YF Chan, P Russell, E Mauceli, J Johnson, ...
Nature 484 (7392), 55-61, 2012
Comparative genomics reveals shared mutational landscape in canine hemangiosarcoma and human angiosarcoma
K Megquier, J Turner-Maier, R Swofford, JH Kim, AL Sarver, C Wang, ...
Molecular Cancer Research 17 (12), 2410-2421, 2019
Variants within the SP110 nuclear body protein modify risk of canine degenerative myelopathy
EL Ivansson, K Megquier, SV Kozyrev, E Murén, IB Körberg, R Swofford, ...
Proceedings of the National Academy of Sciences 113 (22), E3091-E3100, 2016
Exploiting nucleotide composition to engineer promoters
MG Grabherr, J Pontiller, E Mauceli, W Ernst, M Baumann, T Biagi, ...
PLoS One 6 (5), e20136, 2011
An improved microRNA annotation of the canine genome
L Penso-Dolfin, R Swofford, J Johnson, J Alföldi, K Lindblad-Toh, ...
PloS one 11 (4), e0153453, 2016
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