De Novo Assembly and Annotation of the Asian Tiger Mosquito (Aedes albopictus) Repeatome with dnaPipeTE from Raw Genomic Reads and Comparative Analysis with the … C Goubert, L Modolo, C Vieira, C ValienteMoro, P Mavingui, M Boulesteix Genome biology and evolution 7 (4), 1192-1205, 2015 | 209 | 2015 |
TEtools facilitates big data expression analysis of transposable elements and reveals an antagonism between their activity and that of piRNA genes E Lerat, M Fablet, L Modolo, H Lopez-Maestre, C Vieira Nucleic acids research 45 (4), e17-e17, 2017 | 115 | 2017 |
UrQt: an efficient software for the Unsupervised Quality trimming of NGS data L Modolo, E Lerat BMC bioinformatics 16, 1-8, 2015 | 73 | 2015 |
Probabilistic count matrix factorization for single cell expression data analysis G Durif, L Modolo, JE Mold, S Lambert-Lacroix, F Picard Bioinformatics 35 (20), 4011-4019, 2019 | 41 | 2019 |
High dimensional classification with combined adaptive sparse PLS and logistic regression G Durif, L Modolo, J Michaelsson, JE Mold, S Lambert-Lacroix, F Picard Bioinformatics 34 (3), 485-493, 2018 | 41 | 2018 |
Males as somatic investment in a parthenogenetic nematode M Grosmaire, C Launay, M Siegwald, T Brugière, L Estrada-Virrueta, ... Science 363 (6432), 1210-1213, 2019 | 38 | 2019 |
Transposable Element Misregulation Is Linked to the Divergence between Parental piRNA Pathways in Drosophila Hybrids V Romero-Soriano, L Modolo, H Lopez-Maestre, B Mugat, E Pessia, ... Genome biology and evolution 9 (6), 1450-1470, 2017 | 35 | 2017 |
Condensin controls cellular RNA levels through the accurate segregation of chromosomes instead of directly regulating transcription C Hocquet, X Robellet, L Modolo, XM Sun, C Burny, S Cuylen-Haering, ... Elife 7, e38517, 2018 | 33 | 2018 |
Characterizing the interplay between gene nucleotide composition bias and splicing S Lemaire, N Fontrodona, F Aubé, JB Claude, H Polvèche, L Modolo, ... Genome biology 20, 1-21, 2019 | 24 | 2019 |
RNA helicase-dependent gene looping impacts messenger RNA processing S Terrone, J Valat, N Fontrodona, G Giraud, JB Claude, E Combe, ... Nucleic Acids Research 50 (16), 9226-9246, 2022 | 21 | 2022 |
Interplay between coding and exonic splicing regulatory sequences N Fontrodona, F Aubé, JB Claude, H Polvèche, S Lemaire, ... Genome research 29 (5), 711-722, 2019 | 18 | 2019 |
A new genome-wide method to track horizontally transferred sequences: application to Drosophila L Modolo, F Picard, E Lerat Genome biology and evolution 6 (2), 416-432, 2014 | 14 | 2014 |
Allogeneic stem cell transplantation for blast crisis (BC) chronic myelogenous leukemia (CML) in the tyrosine kinase inhibitors (TKIs) era. Analysis of pre-transplant variables … F Nicolini, L Modolo, N Raus, N Milpied, G Socie, I Yakoub-Agha, ... Blood 116 (21), 2266, 2010 | 11 | 2010 |
Evidence for close molecular proximity between reverting and undifferentiated cells S Zreika, C Fourneaux, E Vallin, L Modolo, R Seraphin, A Moussy, ... BMC biology 20 (1), 155, 2022 | 10 | 2022 |
Divergent clonal differentiation trajectories establish CD8+ memory T cell heterogeneity during acute viral infections in humans JE Mold, L Modolo, J Hård, M Zamboni, AJM Larsson, M Stenudd, ... Cell reports 35 (8), 2021 | 9 | 2021 |
Translation-dependent and-independent mRNA decay occur through mutually exclusive pathways defined by ribosome density during T cell activation BC Mercier, E Labaronne, D Cluet, L Guiguettaz, N Fontrodona, ... Genome Research 34 (3), 394-409, 2024 | 7* | 2024 |
Identification and analysis of transposable elements in genomic sequences L Modolo, E Lerat Genome analysis, current procedures and applications, 2014 | 5 | 2014 |
Differentiation is accompanied by a progressive loss in transcriptional memory C Fourneaux, L Racine, C Koering, S Dussurgey, E Vallin, A Moussy, ... BMC biology 22 (1), 58, 2024 | 4 | 2024 |
Condensin positioning at telomeres by shelterin proteins drives sister-telomere disjunction in anaphase L Colin, C Reyes, J Berthezene, L Maestroni, L Modolo, E Toselli, ... Elife 12, RP89812, 2023 | 4 | 2023 |
Clonally distinct differentiation trajectories shape CD8+ memory T cell heterogeneity after acute viral infections in humans JE Mold, L Modolo, J Hård, M Zamboni, AJM Larsson, CJ Eriksson, ... bioRxiv, 832899, 2019 | 4 | 2019 |