| Genome sequencing of herb Tulsi (Ocimum tenuiflorum) unravels key genes behind its strong medicinal properties AK Upadhyay, AR Chacko, A Gandhimathi, P Ghosh, K Harini, AP Joseph, ... BMC plant biology 15, 1-20, 2015 | 110 | 2015 |
| Reconstruction of proto-vertebrate, proto-cyclostome and proto-gnathostome genomes provides new insights into early vertebrate evolution Y Nakatani, P Shingate, V Ravi, NE Pillai, A Prasad, A McLysaght, ... Nature communications 12 (1), 4489, 2021 | 97 | 2021 |
| Chromosome-level assembly of the horseshoe crab genome provides insights into its genome evolution P Shingate, V Ravi, A Prasad, BH Tay, KM Garg, B Chattopadhyay, ... Nature communications 11 (1), 2322, 2020 | 61 | 2020 |
| 3DSwap: curated knowledgebase of proteins involved in 3D domain swapping K Shameer, PN Shingate, SCP Manjunath, M Karthika, G Pugalenthi, ... Database 2011, bar042, 2011 | 42 | 2011 |
| The transcriptome enables the identification of candidate genes behind medicinal value of Drumstick tree (Moringa oleifera) SN Pasha, KM Shafi, AG Joshi, I Meenakshi, K Harini, J Mahita, ... Genomics 112 (1), 621-628, 2020 | 27 | 2020 |
| Expansions, diversification, and interindividual copy number variations of AID/APOBEC family cytidine deaminase genes in lampreys SJ Holland, LM Berghuis, JJ King, LM Iyer, K Sikora, H Fifield, S Peter, ... Proceedings of the National Academy of Sciences 115 (14), E3211-E3220, 2018 | 25 | 2018 |
| Analysis of domain-swapped oligomers reveals local sequence preferences and structural imprints at the linker regions and swapped interfaces P Shingate, R Sowdhamini Public Library of Science 7 (7), e39305, 2012 | 21 | 2012 |
| Chromosome‐level genome assembly of the coastal horseshoe crab (Tachypleus gigas) P Shingate, V Ravi, A Prasad, BH Tay, B Venkatesh Molecular ecology resources 20 (6), 1748-1760, 2020 | 19 | 2020 |
| ECMIS: computational approach for the identification of hotspots at protein-protein interfaces P Shingate, M Manoharan, A Sukhwal, R Sowdhamini BMC bioinformatics 15, 1-10, 2014 | 19 | 2014 |
| Lampreys, the jawless vertebrates, contain three Pax6 genes with distinct expression in eye, brain and pancreas V Ravi, S Bhatia, P Shingate, BH Tay, B Venkatesh, DA Kleinjan Scientific reports 9 (1), 19559, 2019 | 17 | 2019 |
| Antigen receptor repertoires of one of the smallest known vertebrates OB Giorgetti, P Shingate, CP O’Meara, V Ravi, NE Pillai, BH Tay, ... Science Advances 7 (1), eabd8180, 2021 | 10 | 2021 |
| 3PFDB+: improved search protocol and update for the identification of representatives of protein sequence domain families AP Joseph, P Shingate, AK Upadhyay, R Sowdhamini Database 2014, bau026, 2014 | 7 | 2014 |
| The different fates of two Asian horseshoe crab species with different dispersal abilities Q Tang, P Shingate, Y Wardiatno, A John, BH Tay, YC Tay, LM Yap, J Lim, ... Evolutionary applications 14 (8), 2124-2133, 2021 | 5 | 2021 |
| Dataset for the combined transcriptome assembly of M. oleifera and functional annotation KM Shafi, AG Joshi, I Meenakshi, SN Pasha, K Harini, J Mahita, ... Data in Brief 30, 105416, 2020 | 5 | 2020 |
| Voltage-gated sodium channel gene repertoire of lampreys: gene duplications, tissue-specific expression and discovery of a long-lost gene HH Zakon, W Li, NE Pillai, S Tohari, P Shingate, J Ren, B Venkatesh Proceedings of the Royal Society B: Biological Sciences 284 (1863), 20170824, 2017 | 5 | 2017 |
| Energetic calculations to decipher pH-dependent oligomerization and domain swapping of proteins P Shingate, J Warwicker, R Sowdhamini Plos one 10 (6), e0127716, 2015 | 5 | 2015 |
| Genome assembly and chemogenomic profiling of National Flower of Singapore Papilionanthe Miss Joaquim ‘Agnes’ reveals metabolic pathways regulating floral … AH Lim, ZJ Low, PN Shingate, JH Hong, SC Chong, CCY Ng, W Liu, ... Communications biology 5 (1), 967, 2022 | 3 | 2022 |
| A knowledge-driven protocol for prediction of proteins of interest with an emphasis on biosynthetic pathways AG Joshi, K Harini, I Meenakshi, KM Shafi, SN Pasha, J Mahita, ... MethodsX 7, 101053, 2020 | 3 | 2020 |
| Publisher Correction: Reconstruction of proto-vertebrate, protocyclostome and proto-gnathostome genomes provides new insights into early vertebrate evolution Y Nakatani, P Shingate, V Ravi, NE Pillai, A Prasad, A McLysaght, ... Nature Communications 12 (1), 4704, 2021 | 2 | 2021 |
| A sequence data mining protocol to identify best representative sequence for protein domain families VS Gowri, K Shameer, CCS Reddy, P Shingate, R Sowdhamini 2010 IEEE International Conference on Data Mining Workshops, 703-710, 2010 | 2 | 2010 |
Anshul SukhwalNational Centre for Biological SciencesAdresse e-mail validée de ncbs.res.in
