Slim Karkar
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Testing ecological theories with sequence similarity networks: marine ciliates exhibit similar geographic dispersal patterns as multicellular organisms
D Forster, L Bittner, S Karkar, M Dunthorn, S Romac, S Audic, P Lopez, ...
BMC biology 13, 1-16, 2015
Metabolic connectivity as a driver of host and endosymbiont integration
S Karkar, F Facchinelli, DC Price, APM Weber, D Bhattacharya
Proceedings of the National Academy of Sciences 112 (33), 10208-10215, 2015
Deciphering primordial cyanobacterial genome functions from protein network analysis
A Harel, S Karkar, S Cheng, PG Falkowski, D Bhattacharya
Current Biology 25 (5), 628-634, 2015
Lactate dehydrogenases promote glioblastoma growth and invasion via a metabolic symbiosis
J Guyon, I Fernandez‐Moncada, CM Larrieu, CL Bouchez, ...
EMBO molecular medicine 14 (12), e15343, 2022
Sequence similarity network reveals the imprints of major diversification events in the evolution of microbial life
S Cheng, S Karkar, E Bapteste, N Yee, P Falkowski, D Bhattacharya
Frontiers in Ecology and Evolution 2, 72, 2014
A large-scale validation of NOCIt’sa posteriori probability of the number of contributors and its integration into forensic interpretation pipelines
CM Grgicak, S Karkar, X Yearwood-Garcia, LE Alfonse, KR Duffy, DS Lun
Forensic Science International: Genetics 47, 102296, 2020
Statistical modeling of STR capillary electrophoresis signal
S Karkar, LE Alfonse, CM Grgicak, DS Lun
BMC bioinformatics 20 (16), 1-12, 2019
Heritability of surface area and cortical thickness: a comparison between the Human Connectome Project and the UK Biobank dataset
Y Le Guen, S Karkar, A Grigis, C Philippe, JF Mangin, V Frouin
2019 IEEE 16th International Symposium on Biomedical Imaging (ISBI 2019 …, 2019
The methodology behind network thinking: graphs to analyze microbial complexity and evolution
AK Watson, R Lannes, JS Pathmanathan, R Méheust, S Karkar, P Colson, ...
Evolutionary genomics: Statistical and computational methods, 271-308, 2019
MultiTwin: A Software Suite to Analyze Evolution at Multiple Levels of Organization Using Multipartite Graphs
E Corel, JS Pathmanathan, AK Watson, S Karkar, P Lopez, E Bapteste
Genome biology and evolution 10 (10), 2777-2784, 2018
A multi-level parcellation approach for brain functional connectivity analysis
S Karkar, S Faisan, L Thoraval, JR Foucher
2009 Annual International Conference of the IEEE Engineering in Medicine and …, 2009
Network Regularization in Imaging Genetics Improves Prediction Performances and Model Interpretability on Alzheimer’s Disease
N Guigui, C Philippe, A Gloaguen, S Karkar, V Guillemot, T Löfstedt, ...
2019 IEEE 16th International Symposium on Biomedical Imaging (ISBI 2019 …, 2019
Multivariate Haplotype Analysis Of 96 Sulci Opening For 15,612 UK-Biobank Sujects
S Karkar, A Gloaguen, Y Le Guen, M Pierre-Jean, C Dandine-Roulland, ...
2019 IEEE 16th International Symposium on Biomedical Imaging (ISBI 2019 …, 2019
Exploring Biotic Interactions Within Protist Cell Populations Using Network Methods
S Cheng, DC Price, S Karkar, D Bhattacharya
Journal of Eukaryotic Microbiology 61 (4), 399-403, 2014
Genome-wide haplotype association study in imaging genetics using whole-brain sulcal openings of 16,304 UK Biobank subjects
S Karkar, C Dandine-Roulland, JF Mangin, Y Le Guen, C Philippe, ...
European Journal of Human Genetics 29 (9), 1424-1437, 2021
Statistical Modeling of Short-Tandem Repeat Capillary Electrophoresis Profiles
S Karkar, LE Alfonse, CM Grgicak, DS Lun
2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2018
A study of feasibility for genome-wide haplotype association of complex traits in imaging genetics
S Karkar, Y Le Guen, C Philippe, C Dandine-Roulland, M Pierre-Jean, ...
2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2018
Une nouvelle approche de parcellisation multi-niveaux pour l’analyse de la connectivité fonctionnelle cérébrale
S Karkar, S Faisan, L Thoraval, JR Foucher
XXIIeme Colloque GRETSI, 2009
DIMet: An open-source tool for Differential analysis of targeted Isotope-labeled Metabolomics data
J Galvis, J Guyon, B Dartigues, H Hecht, B Grüning, F Specque, ...
Bioinformatics, btae282, 2024
CellsFromSpace: A fast, accurate and reference-free tool to deconvolve and annotate spatially distributed Omics data
C Thuilliez, G Moquin-Beaudry, P Khneisser, MEM Da Costa, S Karkar, ...
bioRxiv, 2023.08. 30.555558, 2023
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