An atlas of over 90,000 conserved noncoding sequences provides insight into crucifer regulatory regions A Haudry, AE Platts, E Vello, DR Hoen, M Leclercq, RJ Williamson, ... Nature genetics 45 (8), 891-898, 2013 | 394 | 2013 |
The strength and pattern of natural selection on gene expression in rice SC Groen, I Ćalić, Z Joly-Lopez, AE Platts, JY Choi, M Natividad, K Dorph, ... Nature 578 (7796), 572-576, 2020 | 107 | 2020 |
Refolding of the integral membrane protein light-harvesting complex II monitored by pulse EPR C Dockter, A Volkov, C Bauer, Y Polyhach, Z Joly-Lopez, G Jeschke, ... Proceedings of the National Academy of Sciences 106 (44), 18485-18490, 2009 | 91 | 2009 |
Exaptation of transposable element coding sequences Z Joly-Lopez, TE Bureau Current opinion in genetics & development 49, 34-42, 2018 | 82 | 2018 |
A Gene Family Derived from Transposable Elements during Early Angiosperm Evolution Has Reproductive Fitness Benefits in Arabidopsis thaliana Z Joly-Lopez, E Forczek, DR Hoen, N Juretic, TE Bureau Public Library of Science 8 (9), e1002931, 2012 | 63 | 2012 |
Diversity and evolution of transposable elements in Arabidopsis Z Joly-Lopez, TE Bureau Chromosome Research 22, 203-216, 2014 | 50 | 2014 |
Phylogenetic and genomic analyses resolve the origin of important plant genes derived from transposable elements Z Joly-Lopez, DR Hoen, M Blanchette, TE Bureau Molecular Biology and Evolution 33 (8), 1937-1956, 2016 | 39 | 2016 |
Rapid evolutionary changes in gene expression in response to climate fluctuations E Hamann, CS Pauli, Z Joly‐Lopez, SC Groen, JS Rest, NC Kane, ... Molecular Ecology 30 (1), 193-206, 2021 | 37 | 2021 |
Abiotic stress phenotypes are associated with conserved genes derived from transposable elements Z Joly-Lopez, E Forczek, E Vello, DR Hoen, A Tomita, TE Bureau Frontiers in Plant Science 8, 2027, 2017 | 35 | 2017 |
Evolutionary systems biology reveals patterns of rice adaptation to drought-prone agro-ecosystems SC Groen, Z Joly-Lopez, AE Platts, M Natividad, Z Fresquez, ... The Plant Cell 34 (2), 759-783, 2022 | 29 | 2022 |
An inferred fitness consequence map of the rice genome Z Joly-Lopez, AE Platts, B Gulko, JY Choi, SC Groen, X Zhong, A Siepel, ... Nature plants 6 (2), 119-130, 2020 | 26 | 2020 |
Reproducing on time when temperature varies: shifts in the timing of courtship by fiddler crabs KA Kerr, JH Christy, Z Joly-Lopez, J Luque, R Collin, F Guichard PloS One 9 (5), e97593, 2014 | 26 | 2014 |
MT1-MMP cooperates with TGF-β receptor-mediated signaling to trigger SNAIL and induce epithelial-to-mesenchymal-like transition in U87 glioblastoma cells S Djediai, N Gonzalez Suarez, L El Cheikh-Hussein, S Rodriguez Torres, ... International Journal of Molecular Sciences 22 (23), 13006, 2021 | 22 | 2021 |
Developing maps of fitness consequences for plant genomes Z Joly-Lopez, JM Flowers, MD Purugganan Current opinion in plant biology 30, 101-107, 2016 | 14 | 2016 |
The seed transcriptome of Rafflesia reveals horizontal gene transfer and convergent evolution: Implications for conserving the world's largest flower J Molina, A Wicaksono, TP Michael, SH Kwak, RD Pedales, Z Joly‐Lopez, ... Plants, People, Planet, 2023 | 10 | 2023 |
The influence of genetic architecture on responses to selection under drought in rice I Ćalić, SC Groen, JY Choi, Z Joly‐Lopez, E Hamann, MA Natividad, ... Evolutionary Applications 15 (10), 1670-1690, 2022 | 8 | 2022 |
Nascent transcription and the associated cis-regulatory landscape in rice JY Choi, AE Platts, A Johary, MD Purugganan, Z Joly-Lopez bioRxiv, 2022.07. 06.498888, 2022 | 1 | 2022 |
System genomics of salinity stress response in rice S Gupta, S Niels Groen, ML Zaidem, AGC Sajise, I Calic, M Natividad, ... bioRxiv, 2024.05. 31.596807, 2024 | | 2024 |
MT1-MMP cooperates with TGF-beta receptor-mediated signaling to trigger SNAIL and induce epithelial-to-mesenchymal-like transition in U87 glioblastoma cells S Djediai, NG Suarez, Z Joly-Lopez, B Annabi Cancer Research 82 (12_Supplement), 5984-5984, 2022 | | 2022 |
The Origin, Evolution and Function of Mustang-A, a Family of Angiosperm-Specific Host Genes Derived from Transposable Elements Z Joly-Lopez McGill University (Canada), 2015 | | 2015 |