Céline Keime
Céline Keime
IGBMC UMR CNRS/INSERM/Université de Strasbourg
Adresse e-mail validée de igbmc.fr
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A comprehensive evaluation of normalization methods for Illumina high-throughput RNA sequencing data analysis
MA Dillies, A Rau, J Aubert, C Hennequet-Antier, M Jeanmougin, ...
Briefings in bioinformatics 14 (6), 671-683, 2013
12412013
seqMINER: an integrated ChIP-seq data interpretation platform
T Ye, AR Krebs, MA Choukrallah, C Keime, F Plewniak, I Davidson, ...
Nucleic acids research 39 (6), e35-e35, 2011
3682011
Essential role of microphthalmia transcription factor for DNA replication, mitosis and genomic stability in melanoma
T Strub, S Giuliano, T Ye, C Bonet, C Keime, D Kobi, S Le Gras, ...
Oncogene 30 (20), 2319-2332, 2011
2222011
Genome-wide nucleosome specificity and function of chromatin remodellers in ES cells
M De Dieuleveult, K Yen, I Hmitou, A Depaux, F Boussouar, DB Dargham, ...
Nature 530 (7588), 113-116, 2016
1532016
Transcription factor MITF and remodeller BRG1 define chromatin organisation at regulatory elements in melanoma cells
P Laurette, T Strub, D Koludrovic, C Keime, S Le Gras, H Seberg, ...
Elife 4, e06857, 2015
1182015
mTOR inhibition reverses acquired endocrine therapy resistance of breast cancer cells at the cell proliferation and gene‐expression levels
SE Ghayad, I Bieche, JA Vendrell, C Keime, R Lidereau, C Dumontet, ...
Cancer science 99 (10), 1992-2003, 2008
852008
Rfx6 maintains the functional identity of adult pancreatic β cells
J Piccand, P Strasser, DJ Hodson, A Meunier, T Ye, C Keime, MC Birling, ...
Cell reports 9 (6), 2219-2232, 2014
842014
Genomic binding of Pol III transcription machinery and relationship with TFIIS transcription factor distribution in mouse embryonic stem cells
L Carriere, S Graziani, O Alibert, Y Ghavi-Helm, F Boussouar, ...
Nucleic acids research 40 (1), 270-283, 2012
762012
Single-cell gene expression signatures reveal melanoma cell heterogeneity
M Ennen, C Keime, D Kobi, G Mengus, D Lipsker, C Thibault-Carpentier, ...
Oncogene 34 (25), 3251-3263, 2015
752015
Transcription factor TEAD4 regulates expression of myogenin and the unfolded protein response genes during C2C12 cell differentiation
A Benhaddou, C Keime, T Ye, A Morlon, I Michel, B Jost, G Mengus, ...
Cell Death & Differentiation 19 (2), 220-231, 2012
722012
Neuronal identity genes regulated by super-enhancers are preferentially down-regulated in the striatum of Huntington's disease mice
M Achour, S Le Gras, C Keime, F Parmentier, FX Lejeune, AL Boutillier, ...
Human molecular genetics 24 (12), 3481-3496, 2015
702015
Genetic analysis of the biosynthesis of 2-methoxy-3-isobutylpyrazine, a major grape-derived aroma compound impacting wine quality
S Guillaumie, A Ilg, S Réty, M Brette, C Trossat-Magnin, S Decroocq, ...
Plant physiology 162 (2), 604-615, 2013
682013
SAGE analysis of mosquito salivary gland transcriptomes during Plasmodium invasion
I Rosinski‐Chupin, J Briolay, P Brouilly, S Perrot, SM Gomez, ...
Cellular microbiology 9 (3), 708-724, 2007
572007
Trim24-repressed VL30 retrotransposons regulate gene expression by producing noncoding RNA
B Herquel, K Ouararhni, I Martianov, S Le Gras, T Ye, C Keime, T Lerouge, ...
Nature structural & molecular biology 20 (3), 339, 2013
552013
A combination of LongSAGE with Solexa sequencing is well suited to explore the depth and the complexity of transcriptome
L Hanriot, C Keime, N Gay, C Faure, C Dossat, P Wincker, ...
BMC genomics 9 (1), 1-9, 2008
502008
Enterocyte purge and rapid recovery is a resilience reaction of the gut epithelium to pore-forming toxin attack
KZ Lee, M Lestradet, C Socha, S Schirmeier, A Schmitz, C Spenlé, ...
Cell host & microbe 20 (6), 716-730, 2016
392016
MITF-high and MITF-low cells and a novel subpopulation expressing genes of both cell states contribute to intra-and intertumoral heterogeneity of primary melanoma
M Ennen, C Keime, G Gambi, A Kieny, S Coassolo, C Thibault-Carpentier, ...
Clinical Cancer Research 23 (22), 7097-7107, 2017
362017
Genes and pathways regulated by androgens in human neural cells, potential candidates for the male excess in autism spectrum disorder
A Quartier, L Chatrousse, C Redin, C Keime, N Haumesser, ...
Biological Psychiatry 84 (4), 239-252, 2018
352018
Identitag, a relational database for SAGE tag identification and interspecies comparison of SAGE libraries
C Keime, F Damiola, D Mouchiroud, L Duret, O Gandrillon
BMC bioinformatics 5 (1), 1-12, 2004
342004
Extensive regulation of diurnal transcription and metabolism by glucocorticoids
BD Weger, M Weger, B Görling, A Schink, C Gobet, C Keime, G Poschet, ...
PLoS genetics 12 (12), e1006512, 2016
322016
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