Byung-Jun Yoon
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Hidden Markov models and their applications in biological sequence analysis
BJ Yoon
Current Genomics 10 (6), 402-415, 2009
3312009
The role of signal-processing concepts in genomics and proteomics
PP Vaidyanathan, BJ Yoon
Journal of the Franklin Institute 341 (1-2), 111-135, 2004
2122004
Accurate and reliable cancer classification based on probabilistic inference of pathway activity
J Su, BJ Yoon, ER Dougherty
PLOS ONE 4 (12), e8161, 2009
1302009
Identification of differentially expressed miRNAs in chicken lung and trachea with avian influenza virus infection by a deep sequencing approach
Y Wang, V Brahmakshatriya, H Zhu, B Lupiani, SM Reddy, BJ Yoon, ...
BMC Genomics 10 (1), 1-20, 2009
1192009
Digital filters for gene prediction applications
PP Vaidyanathan, BJ Yoon
Asilomar Conference on Signals, Systems, and Computers 1, 306-310, 2002
1172002
Wavelet-based denoising by customized thresholding
BJ Yoon, PP Vaidyanathan
2004 IEEE International Conference on Acoustics, Speech, and Signal …, 2004
1162004
SMETANA: accurate and scalable algorithm for probabilistic alignment of large-scale biological networks
SME Sahraeian, BJ Yoon
PLOS ONE 8 (7), e67995, 2013
1062013
Gene and exon prediction using allpass-based filters
PP Vaidyanathan, BJ Yoon
Workshop on Genomic Sig. Proc. And Stat., Raleigh, NC, 2002
1032002
Robust adaptive beamforming with enhanced noise suppression
I Tashev, A Acero, BJ Yoon
US Patent 8,005,238, 2011
932011
Identification of diagnostic subnetwork markers for cancer in human protein-protein interaction network
J Su, BJ Yoon, ER Dougherty
BMC Bioinformatics 11 (6), 1-13, 2010
742010
A network synthesis model for generating protein interaction network families
SME Sahraeian, BJ Yoon
PLOS ONE 7 (8), e41474, 2012
582012
Quantifying the objective cost of uncertainty in complex dynamical systems
BJ Yoon, X Qian, ER Dougherty
IEEE Transactions on Signal Processing 61 (9), 2256-2266, 2013
542013
Optimal experimental design for gene regulatory networks in the presence of uncertainty
R Dehghannasiri, BJ Yoon, ER Dougherty
IEEE/ACM Transactions on Computational Biology and Bioinformatics 12 (4 …, 2014
502014
PicXAA: greedy probabilistic construction of maximum expected accuracy alignment of multiple sequences
SME Sahraeian, BJ Yoon
Nucleic Acids Research 38 (15), 4917-4928, 2010
482010
A novel low-complexity HMM similarity measure
SME Sahraeian, BJ Yoon
IEEE Signal Processing Letters 18 (2), 87-90, 2010
402010
Querying pathways in protein interaction networks based on hidden Markov models
X Qian, SH Sze, BJ Yoon
Journal of Computational Biology 16 (2), 145-157, 2009
362009
Comparative analysis of biological networks: Hidden markov model and markov chain-based approach
BJ Yoon, X Qian, SME Sahraeian
IEEE Signal Processing Magazine 29 (1), 22-34, 2011
322011
Computational identification and analysis of noncoding RNAs
BJ Yoon, PP Vaidyanathan
IEEE Signal Processing Magazine 24 (1), 64-74, 2007
312007
Enhanced stochastic optimization algorithm for finding effective multi-target therapeutics
BJ Yoon
BMC Bioinformatics 12 (1), 1-11, 2011
302011
Effective identification of conserved pathways in biological networks using hidden Markov models
X Qian, BJ Yoon
PLOS ONE 4 (12), e8070, 2009
292009
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