Zheng Siyuan, PhD
Zheng Siyuan, PhD
UT Health San Antonio
Verified email at uthscsa.edu - Homepage
Title
Cited by
Cited by
Year
The cancer genome atlas pan-cancer analysis project
JN Weinstein, EA Collisson, GB Mills, KRM Shaw, BA Ozenberger, ...
Nature genetics 45 (10), 1113, 2013
33602013
The somatic genomic landscape of glioblastoma
CW Brennan, RGW Verhaak, A McKenna, B Campos, H Noushmehr, ...
Cell 155 (2), 462-477, 2013
27932013
Comprehensive, integrative genomic analysis of diffuse lower-grade gliomas
TCGA
N Engl J Med. doi 10, 1056, 2015
1533*2015
Multiplatform analysis of 12 cancer types reveals molecular classification within and across tissues of origin
KA Hoadley, C Yau, DM Wolf, AD Cherniack, D Tamborero, S Ng, ...
Cell 158 (4), 929-944, 2014
10012014
Molecular profiling reveals biologically discrete subsets and pathways of progression in diffuse glioma
M Ceccarelli, FP Barthel, TM Malta, TS Sabedot, SR Salama, BA Murray, ...
Cell 164 (3), 550-563, 2016
9902016
Comprehensive and integrative genomic characterization of hepatocellular carcinoma
A Ally, M Balasundaram, R Carlsen, E Chuah, A Clarke, N Dhalla, RA Holt, ...
Cell 169 (7), 1327-1341. e23, 2017
6632017
Tumor evolution of glioma-intrinsic gene expression subtypes associates with immunological changes in the microenvironment
Q Wang, B Hu, X Hu, H Kim, M Squatrito, L Scarpace, AC deCarvalho, ...
Cancer cell 32 (1), 42-56. e6, 2017
470*2017
PharmMapper server: a web server for potential drug target identification using pharmacophore mapping approach
X Liu, S Ouyang, B Yu, Y Liu, K Huang, J Gong, S Zheng, Z Li, H Li, ...
Nucleic acids research 38 (suppl_2), W609-W614, 2010
4552010
Comprehensive pan-genomic characterization of adrenocortical carcinoma
S Zheng, AD Cherniack, N Dewal, RA Moffitt, L Danilova, BA Murray, ...
Cancer cell 29 (5), 723-736, 2016
3102016
Hdac3 is essential for the maintenance of chromatin structure and genome stability
S Bhaskara, SK Knutson, G Jiang, MB Chandrasekharan, AJ Wilson, ...
Cancer cell 18 (5), 436-447, 2010
2922010
The landscape and therapeutic relevance of cancer-associated transcript fusions
K Yoshihara, Q Wang, W Torres-Garcia, S Zheng, R Vegesna, H Kim, ...
Oncogene 34 (37), 4845-4854, 2015
2882015
Whole-genome and multisector exome sequencing of primary and post-treatment glioblastoma reveals patterns of tumor evolution
H Kim, S Zheng, SS Amini, SM Virk, T Mikkelsen, DJ Brat, J Grimsby, ...
Genome research 25 (3), 316-327, 2015
2622015
Integrative genomic analysis of cholangiocarcinoma identifies distinct IDH-mutant molecular profiles
F Farshidfar, S Zheng, MC Gingras, Y Newton, J Shih, AG Robertson, ...
Cell reports 18 (11), 2780-2794, 2017
2452017
dmGWAS: dense module searching for genome-wide association studies in protein–protein interaction networks
P Jia, S Zheng, J Long, W Zheng, Z Zhao
Bioinformatics 27 (1), 95-102, 2011
2402011
Systematic analysis of telomere length and somatic alterations in 31 cancer types
FP Barthel, W Wei, M Tang, E Martinez-Ledesma, X Hu, SB Amin, ...
Nature genetics 49 (3), 349-357, 2017
1862017
3D structure modeling of cytochrome P450 2C19 and its implication for personalized drug design
JF Wang, DQ Wei, L Li, SY Zheng, YX Li, KC Chou
Biochemical and biophysical research communications 355 (2), 513-519, 2007
150*2007
PRADA: pipeline for RNA sequencing data analysis
W Torres-García, S Zheng, A Sivachenko, R Vegesna, Q Wang, R Yao, ...
Bioinformatics 30 (15), 2224-2226, 2014
1322014
A High Notch Pathway Activation Predicts Response to γ Secretase Inhibitors in Proneural Subtype of Glioma Tumor‐Initiating Cells
N Saito, J Fu, S Zheng, J Yao, S Wang, DD Liu, Y Yuan, EP Sulman, ...
Stem cells 32 (1), 301-312, 2014
1132014
ZFHX4 interacts with the NuRD core member CHD4 and regulates the glioblastoma tumor-initiating cell state
Y Chudnovsky, D Kim, S Zheng, WA Whyte, M Bansal, MA Bray, S Gopal, ...
Cell reports 6 (2), 313-324, 2014
972014
The Pan-Cancer analysis of pseudogene expression reveals biologically and clinically relevant tumour subtypes
L Han, Y Yuan, S Zheng, Y Yang, J Li, ME Edgerton, L Diao, Y Xu, ...
Nature communications 5 (1), 1-9, 2014
932014
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