Ümit Seren
Ümit Seren
Gregor Mendel Institute
Adresse e-mail validée de gmi.oeaw.ac.at - Page d'accueil
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1,135 genomes reveal the global pattern of polymorphism in Arabidopsis thaliana
C Alonso-Blanco, J Andrade, C Becker, F Bemm, J Bergelson, ...
Cell 166 (2), 481-491, 2016
7132016
An efficient multi-locus mixed-model approach for genome-wide association studies in structured populations
V Segura, BJ Vilhjálmsson, A Platt, A Korte, Ü Seren, Q Long, M Nordborg
Nature genetics 44 (7), 825-830, 2012
6092012
Epigenomic diversity in a global collection of Arabidopsis thaliana accessions
T Kawakatsu, SC Huang, F Jupe, E Sasaki, RJ Schmitz, MA Urich, ...
Cell 166 (2), 492-505, 2016
3752016
Massive genomic variation and strong selection in Arabidopsis thaliana lines from Sweden
Q Long, FA Rabanal, D Meng, CD Huber, A Farlow, A Platzer, Q Zhang, ...
Nature genetics 45 (8), 884-890, 2013
3132013
GWAPP: a web application for genome-wide association mapping in Arabidopsis
Ü Seren, BJ Vilhjálmsson, MW Horton, D Meng, P Forai, YS Huang, ...
The Plant Cell 24 (12), 4793-4805, 2012
1302012
Measures for interoperability of phenotypic data: minimum information requirements and formatting
H Ćwiek-Kupczyńska, T Altmann, D Arend, E Arnaud, D Chen, G Cornut, ...
Plant Methods 12 (1), 1-18, 2016
912016
AraPheno: a public database for Arabidopsis thaliana phenotypes
Ü Seren, D Grimm, J Fitz, D Weigel, M Nordborg, K Borgwardt, A Korte
Nucleic Acids Research, gkw986, 2016
622016
Multiple alleles at a single locus control seed dormancy in Swedish Arabidopsis
E Kerdaffrec, DL Filiault, A Korte, E Sasaki, V Nizhynska, U Seren, ...
elife 5, e22502, 2016
472016
The AraGWAS Catalog: a curated and standardized Arabidopsis thaliana GWAS catalog
M Togninalli, Ü Seren, D Meng, J Fitz, M Nordborg, D Weigel, ...
Nucleic acids research 46 (D1), D1150-D1156, 2018
452018
AraPheno and the AraGWAS Catalog 2020: a major database update including RNA-Seq and knockout mutation data for Arabidopsis thaliana
M Togninalli, Ü Seren, JA Freudenthal, JG Monroe, D Meng, M Nordborg, ...
Nucleic acids research 48 (D1), D1063-D1068, 2020
182020
Verification of Arabidopsis stock collections using SNPmatch, a tool for genotyping high-plexed samples
R Pisupati, I Reichardt, Ü Seren, P Korte, V Nizhynska, E Kerdaffrec, ...
Scientific data 4 (1), 1-9, 2017
132017
JAWAMix5: an out-of-core HDF5-based java implementation of whole-genome association studies using mixed models
Q Long, Q Zhang, BJ Vilhjalmsson, P Forai, Ü Seren, M Nordborg
Bioinformatics 29 (9), 1220-1222, 2013
132013
Analysis and visualization of Arabidopsis thaliana GWAS using Web 2.0 technologies
YS Huang, M Horton, BJ Vilhjálmsson, Ü Seren, D Meng, C Meyer, ...
Database 2011, 2011
132011
Extreme genetic signatures of local adaptation during Lotus japonicus colonization of Japan
N Shah, T Wakabayashi, Y Kawamura, CK Skovbjerg, MZ Wang, ...
Nature communications 11 (1), 1-15, 2020
112020
GWA-Portal: Genome-wide association studies made easy
Ü Seren
Methods Mol Biol 1761, 303-319, 2018
102018
Genome-wide association mapping in plants exemplified for root growth in Arabidopsis thaliana
R Slovak, C Göschl, Ü Seren, W Busch
Plant Functional Genomics, 343-357, 2015
42015
Extreme genetic signatures of local adaptation during plant colonization
N Shah, T Wakabayashi, Y Kawamura, CK Skovbjerg, MZ Wang, ...
bioRxiv, 485789, 2018
22018
Verification of Arabidopsis stock collections using SNPmatch-an algorithm for genotyping high-plexed samples
R Pisupati, I Reichardt, Ü Seren, P Korte, V Nizhynska, E Kerdaffrec, ...
bioRxiv, 109520, 2017
22017
AraPheno and the AraGWAS Catalog 2020: A Major Database Update including RNA-Seq and Knockout Mutation Data for Arabidopsis thaliana
A Korte, D Grimm, M Togninalli, Ü Seren, M Nordborg, K Borgwardt, ...
Plant and Animal Genome XXVIII Conference (January 11-15, 2020), 2020
2020
Recent methodological advances in GWAS: multi‐locus and multi‐trait mixed‐models
V Segura, BJ Vilhjálmsson, A Korte, A Platt, Q Long, M Nordborg
Final Conference Noveltree" Tree Breeding, Genomics and Evolutionary Biology …, 2012
2012
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