EVA: continuous automatic evaluation of protein structure prediction servers VA Eyrich, MA Martı-Renom, D Przybylski, MS Madhusudhan, A Fiser, ... Bioinformatics 17 (12), 1242-1243, 2001 | 247 | 2001 |
EVA: evaluation of protein structure prediction servers IYY Koh, VA Eyrich, MA Marti-Renom, D Przybylski, MS Madhusudhan, ... Nucleic Acids Research 31 (13), 3311-3315, 2003 | 219 | 2003 |
EVA: large‐scale analysis of secondary structure prediction B Rost, VA Eyrich Proteins: Structure, Function, and Bioinformatics 45 (S5), 192-199, 2001 | 168 | 2001 |
Prediction of protein tertiary structure to low resolution: performance for a large and structurally diverse test set VA Eyrich, DM Standley, RA Friesner Journal of Molecular Biology 288 (4), 725-742, 1999 | 79 | 1999 |
Protein tertiary structure prediction using a branch and bound algorithm VA Eyrich, DM Standley, AK Felts, RA Friesner Proteins: Structure, Function, and Bioinformatics 35 (1), 41-57, 1999 | 77 | 1999 |
A branch and bound algorithm for protein structure refinement from sparse NMR data sets DM Standley, VA Eyrich, AK Felts, RA Friesner, AE McDermott Journal of molecular biology 285 (4), 1691-1710, 1999 | 50 | 1999 |
CAFASP3 in the spotlight of EVA VA Eyrich, D Przybylski, IYY Koh, O Grana, F Pazos, A Valencia, B Rost Proteins: Structure, Function, and Bioinformatics 53 (S6), 548-560, 2003 | 43 | 2003 |
New tools and expanded data analysis capabilities at the Protein Structure Prediction Center A Kryshtafovych, A Prlic, Z Dmytriv, P Daniluk, M Milostan, V Eyrich, ... Proteins: Structure, Function, and Bioinformatics 69 (S8), 19-26, 2007 | 33 | 2007 |
META-PP: single interface to crucial prediction servers VA Eyrich, B Rost Nucleic Acids Research 31 (13), 3308-3310, 2003 | 28 | 2003 |
Protein structure prediction using a combination of sequence‐based alignment, constrained energy minimization, and structural alignment DM Standley, VA Eyrich, Y An, DL Pincus, JR Gunn, RA Friesner Proteins: Structure, Function, and Bioinformatics 45 (S5), 133-139, 2001 | 23 | 2001 |
EVAcon: a protein contact prediction evaluation service O Grana, VA Eyrich, F Pazos, B Rost, A Valencia Nucleic acids research 33 (suppl_2), W347-W351, 2005 | 20 | 2005 |
Ab Initio Protein Structure Prediction Using a Size‐dependent Tertiary Folding Potential VA Eyrich, RA Friesner, DM Standley Computational Methods for Protein Folding 120, 223-263, 2002 | 7 | 2002 |
System for accepting server predictions in CASP6 VA Eyrich, A Kryshtafovych, M Milostan, K Fidelis Proteins: Structure, Function, and Bioinformatics 61 (S7), 24-26, 2005 | 2 | 2005 |
Simple jury predicts protein secondary structure best B Rost, P Baldi, G Barton, J Cuff, V Eyrich, D Jones, K Karplus, R King, ... Proteins, 2001 | 1 | 2001 |
Fold recognition using composite structural templates followed by constrained global minimization. YL An, D Standley, D Pincus, V Eyrich, RA Friesner ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 222, U411-U411, 2001 | | 2001 |
Ab Initio: Prediction Reports-Protein Structure Prediction Using a Combination of Sequence-Based Alignment, Constrained Energy Minimization, and Structural Alignment Published … DM Standley, VA Eyrich, Y An, DL Pincus, JR Gunn, RA Friesner Proteins-Structure Function and Genetics, 133-139, 2001 | | 2001 |
Global Optimization and Sampling in the Context of Tertiary Structure Prediction: A Comparison of Two Algorithms VA Eyrich, DM Standley, RA Friesner Optimization in Computational Chemistry and Molecular Biology: Local and …, 2000 | | 2000 |
Protein tertiary structure prediction via global optimization of reduced model potential energy functions VA Eyrich Columbia University, 2000 | | 2000 |