| BRANE Clust: Cluster-assisted gene regulatory network inference refinement A Pirayre, C Couprie, L Duval, JC Pesquet IEEE/ACM transactions on computational biology and bioinformatics 15 (3 …, 2017 | 26 | 2017 |
| BRANE Cut: biologically-related a priori network enhancement with graph cuts for gene regulatory network inference A Pirayre, C Couprie, F Bidard, L Duval, JC Pesquet BMC bioinformatics 16 (1), 369, 2015 | 21 | 2015 |
| Kinetic transcriptome analysis reveals an essentially intact induction system in a cellulase hyper-producer Trichoderma reesei strain D Poggi-Parodi, F Bidard, A Pirayre, T Portnoy, C Blugeon, B Seiboth, ... Biotechnology for biofuels 7 (1), 1-16, 2014 | 17 | 2014 |
| Glucose-lactose mixture feeds in industry-like conditions: a gene regulatory network analysis on the hyperproducing Trichoderma reesei strain Rut-C30 A Pirayre, L Duval, C Blugeon, C Firmo, S Perrin, E Jourdier, A Margeot, ... BMC genomics 21 (1), 1-17, 2020 | 9 | 2020 |
| Fast convex optimization for connectivity enforcement in gene regulatory network inference A Pirayre, C Couprie, L Duval, JC Pesquet 2015 IEEE International Conference on Acoustics, Speech and Signal …, 2015 | 9 | 2015 |
| BRANEnet: embedding multilayer networks for omics data integration S Jagtap, A Pirayre, F Bidard, L Duval, FD Malliaros BMC bioinformatics 23 (1), 1-17, 2022 | 8 | 2022 |
| Driving Behavior Identification and Real-World Fuel Consumption Estimation With Crowdsensing Data A Pirayre, P Michel, SS Rodriguez, A Chasse IEEE Transactions on Intelligent Transportation Systems 23 (10), 18378-18391, 2022 | 8 | 2022 |
| HOGMep: Variational Bayes and higher-order graphical models applied to joint image recovery and segmentation A Pirayre, Y Zheng, L Duval, JC Pesquet 2017 IEEE International Conference on Image Processing (ICIP), 3775-3779, 2017 | 8 | 2017 |
| Multiomics Data Integration for Gene Regulatory Network Inference with Exponential Family Embeddings S Jagtap, A Çelikkanat, A Pirayre, F Bidard, L Duval, F Malliaros 29th European Signal Processing Conference (EUSIPCO), 2021 | 5 | 2021 |
| From trips database to real-world fuel consumption. model and large-scale simulation framework P Michel, A Pirayre, SS Rodríguez, A Chasse 2020 IEEE 23rd International Conference on Intelligent Transportation …, 2020 | 5 | 2020 |
| BraneMF: integration of biological networks for functional analysis of proteins S Jagtap, A Çelikkanat, A Pirayre, F Bidard, L Duval, FD Malliaros Bioinformatics 38 (24), 5383-5389, 2022 | 4 | 2022 |
| BRANet: Graph-based Integration of Multi-omics Data with Biological a priori for Regulatory Network Inference S Jagtap, A Pirayre, F Bidard, L Duval, F Malliaros 17th International Conference on Computational Intelligence Methods for …, 2021 | 4 | 2021 |
| A review on graph optimization and algorithmic frameworks A Benfenati, E Chouzenoux, L Duval, JC Pesquet, A Pirayre LIGM-Laboratoire d'Informatique Gaspard-Monge, 2018 | 4 | 2018 |
| Graph inference enhancement with clustering: Application to gene regulatory network reconstruction A Pirayre, C Couprie, L Duval, JC Pesquet 2015 23rd European Signal Processing Conference (EUSIPCO), 2406-2410, 2015 | 4 | 2015 |
| Genome-Wide TSS Distribution in Three Related Clostridia with Normalized Capp-Switch Sequencing R Hocq, S Jagtap, M Boutard, AC Tolonen, L Duval, A Pirayre, ... Microbiology Spectrum 10 (2), e02288-21, 2022 | 2 | 2022 |
| Suppression de ligne de base et débruitage de chromatogrammes par pénalisation asymétrique de positivité et dérivées parcimonieuses L Duval, A Pirayre, X Ning, I Selesnick GRETSI: Colloque francophone de traitement du signal et des images, 2015 | 1 | 2015 |
| Gene regulatory network analysis of Trichoderma reesei grown on glucose-lactose mixtures suggests links between development and cellulase production A Pirayre, L Duval, C Blugeon, C Firmo, S Perrin, E Jourdier, A Margeot, ... | | 2020 |
| Pics, ligne de base, bruit: séparation ternaire de sources assistée (BEADS: positivité, parcimonie), spectres chimiques & miscellanées L DUVAL, A PIRAYRE, X NING, IW SELESNICK | | 2018 |
| Retour sur... la ligne de base BEADS: correction et filtrage conjoints de mesures analytiques exploitant positivité et parcimonie X NING, IW SELESNICK, L DUVAL, A PIRAYRE | | 2017 |
| Reconstruction and clustering with graph optimization and priors on gene networks and images A Pirayre Université Paris Est-Marne-la-Vallée, 2017 | | 2017 |
Laurent DuvalUniversité Gustave-Eiffel-ESIEE Paris & IFP Energies nouvelles ; Research amateur, engineer, projectAdresse e-mail validée de ifpen.fr
