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Pin-kuang Lai
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Coarse-grained modeling of protein second osmotic virial coefficients: sterics and short-ranged attractions
A Grünberger, PK Lai, MA Blanco, CJ Roberts
The Journal of Physical Chemistry B 117 (3), 763-770, 2013
662013
Machine Learning Applied to Determine the Molecular Descriptors Responsible for the Viscosity Behavior of Concentrated Therapeutic Antibodies
PK Lai, A Fernando, TK Cloutier, Y Gokarn, J Zhang, W Schwenger, ...
Molecular Pharmaceutics 18 (3), 1167–1175, 2021
442021
Rapid determination of entropy and free energy of mixtures from molecular dynamics simulations with the two-phase thermodynamic model
PK Lai, CM Hsieh, ST Lin
Physical Chemistry Chemical Physics 14 (43), 15206-15213, 2012
442012
Insights into membrane translocation of protegrin antimicrobial peptides by multistep molecular dynamics simulations
PK Lai, YN Kaznessis
ACS omega 3 (6), 6056-6065, 2018
372018
Machine learning prediction of antibody aggregation and viscosity for high concentration formulation development of protein therapeutics
PK Lai, A Gallegos, N Mody, HA Sathish, BL Trout
mAbs 14 (1), 2026208, 2022
292022
Prediction of miscibility gaps in water/ether mixtures using COSMO-SAC model
ST Lin, LH Wang, WL Chen, PK Lai, CM Hsieh
Fluid phase equilibria 310 (1-2), 19-24, 2011
292011
Machine learning feature selection for predicting high concentration therapeutic antibody aggregation
PK Lai, A Fernando, TK Cloutier, JS Kingsbury, Y Gokarn, KT Halloran, ...
Journal of Pharmaceutical Sciences 110 (4), 1583-1591, 2020
282020
Calculation of therapeutic antibody viscosity with coarse-grained models, hydrodynamic calculations and machine learning-based parameters
PK Lai, JW Swan, BL Trout
MAbs 13 (1), 1907882, 2021
262021
Identification and elucidation of proline‐rich antimicrobial peptides with enhanced potency and delivery
PK Lai, DT Tresnak, BJ Hackel
Biotechnology and bioengineering 116 (10), 2439–2450, 2019
262019
Free Energy Calculations of Microcin J25 Variants Binding to the FhuA Receptor
PK Lai, YN Kaznessis
Journal of Chemical Theory and Computation 13 (7), 3413-3423, 2017
182017
Systematic mutagenesis of oncocin reveals enhanced activity and insights into the mechanisms of antimicrobial activity
PK Lai, K Geldart, S Ritter, YN Kaznessis, BJ Hackel
Molecular systems design & engineering 3 (6), 930-941, 2018
162018
DeepSCM: an efficient convolutional neural network surrogate model for the screening of therapeutic antibody viscosity
PK Lai
Computational and Structural Biotechnology Journal 20, 2143-2152, 2022
142022
Differences in human IgG1 and IgG4 S228P monoclonal antibodies viscosity and self-interactions: Experimental assessment and computational predictions of domain interactions
PK Lai, G Ghag, Y Yu, V Juan, L Fayadat-Dilman, BL Trout
Mabs 13 (1), 1991256, 2021
122021
Rapid determination of entropy for flexible molecules in condensed phase from the two-phase thermodynamic model
PK Lai, ST Lin
RSC Advances 4 (19), 9522-9533, 2014
122014
Internal coordinate density of state from molecular dynamics simulation
PK Lai, ST Lin
Journal of Computational Chemistry 36 (8), 507-517, 2015
52015
Teaching biologics design using molecular modeling and simulations
A Phillips, A Srinivas, I Prentoska, M O'Dea, M Kustrup, S Hurley, S Bruno, ...
Biochemistry and Molecular Biology Education, 2024
2024
DeepSP: Deep Learning-Based Spatial Properties to Predict Monoclonal Antibody Stability
LA Kalejaye, IE Wu, T Terry, PK Lai
bioRxiv, 2024.02. 28.582582, 2024
2024
Investigating the mechanisms of antibody binding to alpha-synuclein for the treatment of Parkinson's Disease
MC Harrison, PK Lai
bioRxiv, 2024.02. 27.582350, 2024
2024
Determination of Metabolic Fluxes by Deep Learning of Isotope Labeling Patterns
RC Law, S O’Keeffe, G Nurwono, R Ki, A Lakhani, PK Lai, JO Park
bioRxiv, 2023
2023
Teaching biologics formulation using molecular modeling and simulations
A Phillips, A Srinivas, IP Prentoska, M O'Dea, M Kustrup, S Hurley, ...
2023
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