Michael Sammeth
Michael Sammeth
Institute of Biophysics Carlos Chagas Filho (IBCCF), Federal University of Rio de Janeiro (UFRJ)
Adresse e-mail validée de sammeth.net - Page d'accueil
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An integrated encyclopedia of DNA elements in the human genome
ENCODE Project Consortium
Nature 489 (7414), 57, 2012
118162012
Landscape of transcription in human cells
S Djebali, CA Davis, A Merkel, A Dobin, T Lassmann, A Mortazavi, ...
Nature 489 (7414), 101-108, 2012
40322012
The genotype-tissue expression (GTEx) project
J Lonsdale, J Thomas, M Salvatore, R Phillips, E Lo, S Shad, R Hasz, ...
Nature genetics 45 (6), 580-585, 2013
40252013
The Genotype-Tissue Expression (GTEx) pilot analysis: Multitissue gene regulation in humans
GTEx Consortium
Science 348 (6235), 648-660, 2015
29522015
Transcriptome and genome sequencing uncovers functional variation in humans
T Lappalainen, M Sammeth, MR Friedländer, P Ac‘t Hoen, J Monlong, ...
Nature 501 (7468), 506-511, 2013
15392013
Genetic effects on gene expression across human tissues
GTEx Consortium
Nature 550 (7675), 204, 2017
13092017
The human transcriptome across tissues and individuals
M Melé, PG Ferreira, F Reverter, DS DeLuca, J Monlong, M Sammeth, ...
Science 348 (6235), 660-665, 2015
8682015
Assessment of transcript reconstruction methods for RNA-seq
T Steijger, JF Abril, PG Engström, F Kokocinski, TJ Hubbard, R Guigó, ...
Nature methods 10 (12), 1177-1184, 2013
5452013
The GEM mapper: fast, accurate and versatile alignment by filtration
S Marco-Sola, M Sammeth, R Guigó, P Ribeca
Nature methods 9 (12), 1185, 2012
4992012
Nucleosome positioning as a determinant of exon recognition
H Tilgner, C Nikolaou, S Althammer, M Sammeth, M Beato, J Valcárcel, ...
Nature structural & molecular biology 16 (9), 996, 2009
4712009
Genome-wide association study in Asian populations identifies variants in ETS1 and WDFY4 associated with systemic lupus erythematosus
W Yang, N Shen, DQ Ye, Q Liu, Y Zhang, XX Qian, N Hirankarn, D Ying, ...
PLoS Genet 6 (2), e1000841, 2010
3982010
The human pancreatic islet transcriptome: expression of candidate genes for type 1 diabetes and the impact of pro-inflammatory cytokines
DL Eizirik, M Sammeth, T Bouckenooghe, G Bottu, G Sisino, ...
PLoS Genet 8 (3), e1002552, 2012
3502012
Modelling and simulating generic RNA-Seq experiments with the flux simulator
T Griebel, B Zacher, P Ribeca, E Raineri, V Lacroix, R Guigó, M Sammeth
Nucleic acids research 40 (20), 10073-10083, 2012
2662012
A general definition and nomenclature for alternative splicing events
M Sammeth, S Foissac, R Guigó
PLoS Comput Biol 4 (8), e1000147, 2008
2622008
A general definition and nomenclature for alternative splicing events
M Sammeth, S Foissac, R Guigó
PLoS Comput Biol 4 (8), e1000147, 2008
2622008
Dynamic landscape and regulation of RNA editing in mammals
MH Tan, Q Li, R Shanmugam, R Piskol, J Kohler, AN Young, KI Liu, ...
Nature 550 (7675), 249-254, 2017
2502017
Based Upon Repeat Pattern (BURP): an algorithm to characterize the long-term evolution of Staphylococcus aureus populations based on spa polymorphisms
A Mellmann, T Weniger, C Berssenbrügge, J Rothgänger, M Sammeth, ...
BMC microbiology 7 (1), 1-6, 2007
2372007
ASTALAVISTA: dynamic and flexible analysis of alternative splicing events in custom gene datasets
S Foissac, M Sammeth
Nucleic acids research 35 (suppl_2), W297-W299, 2007
2132007
Bioinformatics approaches for genomics and post genomics applications of next-generation sequencing
DS Horner, G Pavesi, T Castrignano, PDO De Meo, S Liuni, M Sammeth, ...
Briefings in bioinformatics 11 (2), 181-197, 2010
2112010
Effect of predicted protein-truncating genetic variants on the human transcriptome
MA Rivas, M Pirinen, DF Conrad, M Lek, EK Tsang, KJ Karczewski, ...
Science 348 (6235), 666-669, 2015
1982015
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