Rory Johnson

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	Toutes	Depuis 2015
Citations	23761	18863
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Coauteurs

Roderic GuigoProfessor of Bioinformatics, Center for Genomic Regulation, Universitat Pompeu FabraAdresse e-mail validée de crg.cat
Lawrence W. StantonQatar Biomedical Research InstituteAdresse e-mail validée de hbku.edu.qa
Carme ArnanCRGAdresse e-mail validée de crg.es
Sarah DjebaliIRSD, INSERM, ToulouseAdresse e-mail validée de inserm.fr
Thierry PedrazziniUniversity of Lausanne Medical SchoolAdresse e-mail validée de chuv.ch
Rudi MichelettiucsdAdresse e-mail validée de ucsd.edu
Andrés LanzósData Scientist at BiognosysAdresse e-mail validée de runbox.com
Samir OunzainHAYA TherapeuticsAdresse e-mail validée de hayatx.com
Michael AlexanianGladstone Institute of Cardiovascular DiseaseAdresse e-mail validée de gladstone.ucsf.edu
Pedro G. FerreiraDepartment of Computer Science, Faculty of Sciences University of Porto; INESC-TECAdresse e-mail validée de fc.up.pt
Dmitri PervouchineSkolkovo Institute for Science and TechnologyAdresse e-mail validée de skoltech.ru
Marta MeléGroup Leader at Barcelona Supercomputing CenterAdresse e-mail validée de bsc.es
Michael SammethInstitute of Biophysics Carlos Chagas Filho (IBCCF), Federal University of Rio de Janeiro (UFRJ)Adresse e-mail validée de sammeth.net
Jean MonlongUC Santa Cruz Genomics Institute, University of California, Santa CruzAdresse e-mail validée de mail.mcgill.ca
Julien LagardeCentre for Genomic RegulationAdresse e-mail validée de crg.es
Shi Yan NgInstitute of Molecular and Cell Biology, A*STAR SingaporeAdresse e-mail validée de imcb.a-star.edu.sg
Thomas GingerasProfessor of Functional Genomics, Cold Spring Harbor LaboratoryAdresse e-mail validée de cshl.edu
Adam FrankishSenior Staff Scientist, Wellcome Trust Sanger InstituteAdresse e-mail validée de sanger.ac.uk
Barbara Uszczynska-RatajczakIIMCBAdresse e-mail validée de iimcb.gov.pl
Gireesh BoguDepartment of Genetics, Stanford UniveristyAdresse e-mail validée de stanford.edu

Rory Johnson

University College Dublin

Adresse e-mail validée de ucd.ie - Page d'accueil

Long Noncoding RNA RNA biology Genomics Cancer CRISPR


Titre Trier par citations Trier par année Trier par titre	Citée par Citée par	Année
An integrated encyclopedia of DNA elements in the human genome ENCODE Project Consortium Nature 489 (7414), 57-74, 2012	9334	2012
Landscape of transcription in human cells S Djebali, CA Davis, A Merkel, A Dobin, T Lassmann, A Mortazavi, ... Nature 489 (7414), 101-108, 2012	3797	2012
The GENCODE v7 catalog of human long noncoding RNAs: analysis of their gene structure, evolution, and expression T Derrien, R Johnson, G Bussotti, A Tanzer, S Djebali, H Tilgner, ... Genome research 22 (9), 1775-1789, 2012	3611	2012
The human transcriptome across tissues and individuals M Melé, PG Ferreira, F Reverter, DS DeLuca, J Monlong, M Sammeth, ... Science 348 (6235), 660-665, 2015	808	2015
GENCODE reference annotation for the human and mouse genomes A Frankish, M Diekhans, AM Ferreira, R Johnson, I Jungreis, J Loveland, ... Nucleic acids research 47 (D1), D766-D773, 2019	601	2019
Human long non‐coding RNAs promote pluripotency and neuronal differentiation by association with chromatin modifiers and transcription factors SY Ng, R Johnson, LW Stanton The EMBO journal 31 (3), 522-533, 2012	457	2012
Deep sequencing of subcellular RNA fractions shows splicing to be predominantly co-transcriptional in the human genome but inefficient for lncRNAs H Tilgner, DG Knowles, R Johnson, CA Davis, S Chakrabortty, S Djebali, ... Genome research 22 (9), 1616-1625, 2012	388	2012
A microRNA-based gene dysregulation pathway in Huntington's disease R Johnson, C Zuccato, ND Belyaev, DJ Guest, E Cattaneo, NJ Buckley Neurobiology of disease 29 (3), 438-445, 2008	352	2008
Genome-wide computational identification and manual annotation of human long noncoding RNA genes H Jia, M Osak, GK Bogu, LW Stanton, R Johnson, L Lipovich Rna 16 (8), 1478-1487, 2010	341	2010
Long non-coding RNAs in Huntington's disease neurodegeneration R Johnson Neurobiology of disease 46 (2), 245-254, 2012	311	2012
MacroRNA underdogs in a microRNA world: evolutionary, regulatory, and biomedical significance of mammalian long non-protein-coding RNA L Lipovich, R Johnson, CY Lin Biochimica et Biophysica Acta (BBA)-Gene Regulatory Mechanisms 1799 (9), 597-615, 2010	219	2010
Genome-wide profiling of the cardiac transcriptome after myocardial infarction identifies novel heart-specific long non-coding RNAs S Ounzain, R Micheletti, T Beckmann, B Schroen, M Alexanian, I Pezzuto, ... European heart journal 36 (6), 353-368, 2015	213	2015
Pan-cancer analysis of whole genomes I The, TPCA of Whole, Genomes Consortium Nature 578 (7793), 82, 2020	209	2020
The RIDL hypothesis: transposable elements as functional domains of long noncoding RNAs R Johnson, R Guigó Rna 20 (7), 959-976, 2014	196	2014
REST regulates distinct transcriptional networks in embryonic and neural stem cells R Johnson, CH Teh, G Kunarso, KY Wong, G Srinivasan, ML Cooper, ... PLoS Biol 6 (10), e256, 2008	196	2008
Distinct profiles of REST interactions with its target genes at different stages of neuronal development YM Sun, DJ Greenway, R Johnson, M Street, ND Belyaev, J Deuchars, ... Molecular biology of the cell 16 (12), 5630-5638, 2005	182	2005
Transcriptome characterization by RNA sequencing identifies a major molecular and clinical subdivision in chronic lymphocytic leukemia PG Ferreira, P Jares, D Rico, G Gómez-López, A Martínez-Trillos, ... Genome research 24 (2), 212-226, 2014	177	2014
Towards a complete map of the human long non-coding RNA transcriptome B Uszczynska-Ratajczak, J Lagarde, A Frankish, R Guigó, R Johnson Nature Reviews Genetics 19 (9), 535-548, 2018	158	2018
CARMEN, a human super enhancer-associated long noncoding RNA controlling cardiac specification, differentiation and homeostasis S Ounzain, R Micheletti, C Arnan, I Plaisance, D Cecchi, B Schroen, ... Journal of molecular and cellular cardiology 89, 98-112, 2015	141	2015
Identification of the REST regulon reveals extensive transposable element-mediated binding site duplication R Johnson, RJ Gamblin, L Ooi, AW Bruce, IJ Donaldson, DR Westhead, ... Nucleic acids research 34 (14), 3862-3877, 2006	135	2006

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