Krishnakumar Mayuram Ravikumar
Krishnakumar Mayuram Ravikumar
Lead Data Scientist, Riviera Partners
Adresse e-mail validée de ucdavis.edu
TitreCitée parAnnée
Molecular basis for optical clearing of collagenous tissues
JM Hirshburg, KM Ravikumar, W Hwang, AT Yeh
Journal of biomedical optics 15 (5), 055002, 2010
562010
Region‐specific role of water in collagen unwinding and assembly
KM Ravikumar, W Hwang
Proteins: Structure, Function, and Bioinformatics 72 (4), 1320-1332, 2008
492008
Engineering amyloid fibrils from β-solenoid proteins for biomaterials applications
MDR Peralta, A Karsai, A Ngo, C Sierra, KT Fong, NR Hayre, N Mirzaee, ...
ACS nano 9 (1), 449-463, 2015
462015
Quantitative mapping of protein structure by hydroxyl radical footprinting-mediated structural mass spectrometry: a protection factor analysis
W Huang, KM Ravikumar, MR Chance, S Yang
Biophysical journal 108 (1), 107-115, 2015
462015
Fast-SAXS-pro: A unified approach to computing SAXS profiles of DNA, RNA, protein, and their complexes
KM Ravikumar, W Huang, S Yang
The Journal of chemical physics 138 (2), 01B609, 2013
422013
Coarse-grained simulations of protein-protein association: an energy landscape perspective
KM Ravikumar, W Huang, S Yang
Biophysical journal 103 (4), 837-845, 2012
412012
Spontaneous unwinding of a labile domain in a collagen triple helix
K Ravikumar, J Humphrey, W Hwang
Journal of Mechanics of Materials and Structures 2 (6), 999-1010, 2007
192007
Role of hydration force in the self-assembly of collagens and amyloid steric zipper filaments
KM Ravikumar, W Hwang
Journal of the American Chemical Society 133 (30), 11766-11773, 2011
182011
Theoretical modeling of multiprotein complexes by iSPOT: Integration of small-angle X-ray scattering, hydroxyl radical footprinting, and computational docking
W Huang, KM Ravikumar, M Parisien, S Yang
Journal of structural biology 196 (3), 340-349, 2016
162016
Cross‐talk between the ligand‐and DNA‐binding domains of estrogen receptor
W Huang, GL Greene, KM Ravikumar, S Yang
Proteins: Structure, Function, and Bioinformatics 81 (11), 1900-1909, 2013
122013
A newfound cancer-activating mutation reshapes the energy landscape of estrogen-binding domain
W Huang, KM Ravikumar, S Yang
Journal of chemical theory and computation 10 (8), 2897-2900, 2014
92014
In silico measurements of twist and bend moduli for β-solenoid protein self-assembly units
LP Heinz, KM Ravikumar, DL Cox
Nano letters 15 (5), 3035-3040, 2015
82015
High Tensile Strength of Engineered β-Solenoid Fibrils via Sonication and Pulling
Z Peng, AS Parker, MDR Peralta, KM Ravikumar, DL Cox, MD Toney
Biophysical journal 113 (9), 1945-1955, 2017
32017
Site-directed mutant libraries for isolating minimal mutations yielding functional changes
D Chung, SC Potter, AC Tanomrat, KM Ravikumar, MD Toney
Protein Engineering, Design and Selection 30 (5), 347-357, 2017
32017
Molecular dynamics-based strength estimates of beta solenoid proteins
A Parker, K Ravikumar, D Cox
Soft matter 13 (36), 6218-6226, 2017
12017
Energy Evaluation of β-Strand Packing in a Fibril-Forming SH3 Domain
S Yang, KM Ravikumar, H Levine
The Journal of Physical Chemistry B 117 (42), 13051-13057, 2013
12013
Integrative SAXS‐Driven Computational Modeling of Biomolecular Complexes
L Song, L Lu, W Huang, KM Ravikumar, J Meng, S Yang
Synchrotron Radiation in Materials Science: Light Sources, Techniques, and …, 2018
2018
Estimates of Twisting and Bending Rigidities of Beta-Solenoid Proteins Using Molecular Dynamics
A Parker, K Ravikumar, D Cox
APS March Meeting Abstracts, 2017
2017
Mechanical Strength of Beta-Solenoid Proteins Under Bending and Twisting Simulations
A Parker, K Ravikumar, D Cox
Bulletin of the American Physical Society 61, 2016
2016
Designing beta solenoid proteins for nanoscale materials and devices
M Peralta, Z Peng, A Karsai, A Ngo, C Sierra, K Ravikumar, N Hayre, ...
ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 251, 2016
2016
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