Tulio de Oliveira
Tulio de Oliveira
KRISP, UKZN
Verified email at ukzn.ac.za - Homepage
Title
Cited by
Cited by
Year
An automated genotyping system for analysis of HIV-1 and other microbial sequences
T De Oliveira, K Deforche, S Cassol, M Salminen, D Paraskevis, ...
Bioinformatics 21 (19), 3797-3800, 2005
5172005
Automated subtyping of HIV-1 genetic sequences for clinical and surveillance purposes: performance evaluation of the new REGA version 3 and seven other tools
AC Pineda-Peña, NR Faria, S Imbrechts, P Libin, AB Abecasis, ...
Infection, genetics and evolution 19, 337-348, 2013
2142013
A standardized framework for accurate, high-throughput genotyping of recombinant and non-recombinant viral sequences
LCJ Alcantara, S Cassol, P Libin, K Deforche, OG Pybus, M Van Ranst, ...
Nucleic acids research 37 (suppl_2), W634-W642, 2009
1672009
Global epidemiology of drug resistance after failure of WHO recommended first-line regimens for adult HIV-1 infection: a multicentre retrospective cohort study
J Gregson, M Tang, N Ndembi, RL Hamers, SY Rhee, VC Marconi, ...
The Lancet infectious diseases 16 (5), 565-575, 2016
1602016
Transmission networks and risk of HIV infection in KwaZulu-Natal, South Africa: a community-wide phylogenetic study
T De Oliveira, ABM Kharsany, T Gräf, C Cawood, D Khanyile, A Grobler, ...
The lancet HIV 4 (1), e41-e50, 2017
1592017
HIV-1 and HCV sequences from Libyan outbreak
T De Oliveira, OG Pybus, A Rambaut, M Salemi, S Cassol, M Ciccozzi, ...
Nature 444 (7121), 836-837, 2006
1582006
Molecular cloning and functional analysis of three type D endogenous retroviruses of sheep reveal a different cell tropism from that of the highly related exogenous jaagsiekte …
M Palmarini, C Hallwirth, D York, C Murgia, T De Oliveira, T Spencer, ...
Journal of Virology 74 (17), 8065-8076, 2000
1522000
HIV-1 drug resistance before initiation or re-initiation of first-line antiretroviral therapy in low-income and middle-income countries: a systematic review and meta-regression …
RK Gupta, J Gregson, N Parkin, H Haile-Selassie, A Tanuri, LA Forero, ...
The Lancet infectious diseases 18 (3), 346-355, 2018
1492018
A specific subtype C of human immunodeficiency virus type 1 circulates in Brazil
MA Soares, T de Oliveira, RM Brindeiro, RS Diaz, EC Sabino, L Brigido, ...
Aids 17 (1), 11-21, 2003
1332003
A predominantly HIV type 1 subtype C-restricted epidemic in South African urban populations
JHV Harmelen, EVD Ryst, AS Loubser, D York, S Madurai, S Lyons, ...
AIDS research and human retroviruses 15 (4), 395-398, 1999
1271999
Spread of yellow fever virus outbreak in Angola and the Democratic Republic of the Congo 2015–16: a modelling study
MUG Kraemer, NR Faria, RC Reiner Jr, N Golding, B Nikolay, S Stasse, ...
The Lancet infectious diseases 17 (3), 330-338, 2017
1232017
Recombination confounds the early evolutionary history of human immunodeficiency virus type 1: subtype G is a circulating recombinant form
AB Abecasis, P Lemey, N Vidal, T de Oliveira, M Peeters, R Camacho, ...
Journal of virology 81 (16), 8543-8551, 2007
1212007
Universal test and treat and the HIV epidemic in rural South Africa: a phase 4, open-label, community cluster randomised trial
CC Iwuji, J Orne-Gliemann, J Larmarange, E Balestre, R Thiebaut, ...
The lancet HIV 5 (3), e116-e125, 2018
1162018
Renewing Felsenstein’s phylogenetic bootstrap in the era of big data
F Lemoine, JBD Entfellner, E Wilkinson, D Correia, MD Felipe, ...
Nature 556 (7702), 452-456, 2018
1152018
Microbial genome-wide association studies: lessons from human GWAS
RA Power, J Parkhill, T de Oliveira
Nature reviews genetics 18 (1), 41, 2017
1152017
Genomic and epidemiological monitoring of yellow fever virus transmission potential
NR Faria, MUG Kraemer, SC Hill, JG De Jesus, RS Aguiar, FCM Iani, ...
Science 361 (6405), 894-899, 2018
1142018
Antiretroviral drug resistance surveillance among drug-naive HIV-1-infected individuals in Gauteng Province, South Africa in 2002 and 2004
V Pillay, J Ledwaba, G Hunt, M Rakgotho, B Singh, L Makubalo, ...
Antiviral therapy 13, 101, 2008
1132008
Concentrated HIV sub-epidemics in generalized epidemic settings
F Tanser, T de Oliveira, M Maheu-Giroux, T Bärnighausen
Current Opinion in HIV and AIDS 9 (2), 115, 2014
1042014
Phylodynamic analysis of human immunodeficiency virus type 1 in distinct brain compartments provides a model for the neuropathogenesis of AIDS
M Salemi, SL Lamers, S Yu, T De Oliveira, WM Fitch, MS McGrath
Journal of virology 79 (17), 11343-11352, 2005
1012005
Molecular characteristics of human immunodeficiency virus type 1 subtype C viruses from KwaZulu-Natal, South Africa: implications for vaccine and antiretroviral control strategies
M Gordon, T De Oliveira, K Bishop, HM Coovadia, L Madurai, ...
Journal of virology 77 (4), 2587-2599, 2003
982003
The system can't perform the operation now. Try again later.
Articles 1–20