Paweł Wojciechowski
Paweł Wojciechowski
Institute of Computing Science, Poznan University of Technology
Adresse e-mail validée de cs.put.poznan.pl
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Protein alignment algorithms with an efficient backtracking routine on multiple GPUs
J Blazewicz, W Frohmberg, M Kierzynka, E Pesch, P Wojciechowski
BMC bioinformatics 12 (1), 1-17, 2011
722011
G-MSA—A GPU-based, fast and accurate algorithm for multiple sequence alignment
J Blazewicz, W Frohmberg, M Kierzynka, P Wojciechowski
Journal of Parallel and Distributed Computing 73 (1), 32-41, 2013
482013
G-DNA–a highly efficient multi-GPU/MPI tool for aligning nucleotide reads
W Frohmberg, M Kierzynka, J Blazewicz, P Gawron, P Wojciechowski
Bulletin of the Polish Academy of Sciences. Technical Sciences 61 (4), 989--992, 2013
172013
Identification of altered developmental pathways in human juvenile HD iPSC with 71Q and 109Q using transcriptome profiling
K Świtońska, WJ Szlachcic, L Handschuh, P Wojciechowski, Ł Marczak, ...
Frontiers in cellular neuroscience 12, 528, 2019
142019
Simultaneous detection of mutations and copy number variation of NPM1 in the acute myeloid leukemia using multiplex ligation-dependent probe amplification
M Marcinkowska-Swojak, L Handschuh, P Wojciechowski, M Goralski, ...
Mutation Research/Fundamental and Molecular Mechanisms of Mutagenesis 786, 14-26, 2016
142016
NPM1 alternative transcripts are upregulated in acute myeloid and lymphoblastic leukemia and their expression level affects patient outcome
L Handschuh, P Wojciechowski, M Kazmierczak, ...
Journal of translational medicine 16 (1), 1-16, 2018
122018
Some remarks on evaluating the quality of the multiple sequence alignment based on the BAliBASE benchmark
J Blazewicz, P Formanowicz, P Wojciechowski
International Journal of Applied Mathematics and Computer Science 19 (4), 675, 2009
102009
Graph algorithms for DNA sequencing–origins, current models and the future
J Blazewicz, M Kasprzak, M Kierzynka, W Frohmberg, A Swiercz, ...
European Journal of Operational Research 264 (3), 799-812, 2018
92018
Translational and structural analysis of the shortest legume ENOD40 gene in Lupinus luteus.
J Podkowinski, A Zmienko, B Florek, P Wojciechowski, A Rybarczyk, ...
Acta Biochimica Polonica 56 (1), 2009
92009
DNA sequence assembly involving an acyclic graph model
J Blazewicz, W Frohmberg, P Gawron, M Kasprzak, M Kierzynka, ...
Foundations of Computing and Decision Sciences 38 (1), 25-34, 2013
82013
AthCNV: A map of DNA copy number variations in the Arabidopsis genome
A Zmienko, M Marszalek-Zenczak, P Wojciechowski, A Samelak-Czajka, ...
The Plant Cell 32 (6), 1797-1819, 2020
72020
G-MAPSEQ–a new method for mapping reads to a reference genome
P Wojciechowski, W Frohmberg, M Kierzynka, P Zurkowski, J Blazewicz
Foundations of Computing and Decision Sciences 41 (2), 123-142, 2016
72016
G-PAS 2.0-an improved version of protein alignment tool with an efficient backtracking routine on multiple GPUs
W Frohmberg, M Kierzynka, J Blazewicz, P Wojciechowski
Bulletin of the Polish Academy of Sciences. Technical Sciences 60 (3), 491-494, 2012
72012
GeVaDSs–decision support system for novel Genetic Vaccine development process
J Blazewicz, M Borowski, W Chaara, P Kedziora, D Klatzmann, ...
BMC bioinformatics 13 (1), 1-16, 2012
62012
GRASShopPER—An algorithm for de novo assembly based on GPU alignments
A Swiercz, W Frohmberg, M Kierzynka, P Wojciechowski, P Zurkowski, ...
PloS one 13 (8), e0202355, 2018
42018
Reference Alignment Based Methods for Quality Evaluation of Multiple Sequence Alignment-A Survey
P Wojciechowski, P Formanowicz, J Blazewicz
Current Bioinformatics 9 (1), 44-56, 2014
22014
Parallel algorithms for evolutionary history reconstruction
J Błażewicz, P Formanowicz, P Kędziora, P Wojciechowski
International Conference on Parallel Processing and Applied Mathematics …, 2003
22003
Genome-scale de novo assembly using ALGA
S Swat, A Laskowski, J Badura, W Frohmberg, P Wojciechowski, ...
Bioinformatics, 2021
2021
G-DNA–a highly efficient multi-GPU/MPI tool for aligning nucleotide reads
P Gawron, W Frohmberg, M Kierzynka, J Blazewicz, P Wojciechowski
Bulletin of the Polish Academy of Sciences. Technical Sciences, 2014
2014
G-MSA-a powerful GPU-based tool for multiple sequence alignment
W Frohmberg, M Kierzynka, J Błażewicz, P Wojciechowski
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