| Protein alignment algorithms with an efficient backtracking routine on multiple GPUs J Blazewicz, W Frohmberg, M Kierzynka, E Pesch, P Wojciechowski BMC bioinformatics 12, 1-17, 2011 | 78 | 2011 |
| G-MSA—A GPU-based, fast and accurate algorithm for multiple sequence alignment J Blazewicz, W Frohmberg, M Kierzynka, P Wojciechowski Journal of Parallel and Distributed Computing 73 (1), 32-41, 2013 | 51 | 2013 |
| AthCNV: a map of DNA copy number variations in the Arabidopsis genome A Zmienko, M Marszalek-Zenczak, P Wojciechowski, A Samelak-Czajka, ... The Plant Cell 32 (6), 1797-1819, 2020 | 32 | 2020 |
| Identification of altered developmental pathways in human juvenile HD iPSC with 71Q and 109Q using transcriptome profiling K Świtońska, WJ Szlachcic, L Handschuh, P Wojciechowski, Ł Marczak, ... Frontiers in Cellular Neuroscience 12, 528, 2019 | 31 | 2019 |
| NPM1 alternative transcripts are upregulated in acute myeloid and lymphoblastic leukemia and their expression level affects patient outcome L Handschuh, P Wojciechowski, M Kazmierczak, ... Journal of translational medicine 16, 1-16, 2018 | 23 | 2018 |
| G-DNA–a highly efficient multi-GPU/MPI tool for aligning nucleotide reads W Frohmberg, M Kierzynka, J Blazewicz, P Gawron, P Wojciechowski Bulletin of the Polish Academy of Sciences. Technical Sciences 61 (4), 989--992, 2013 | 19 | 2013 |
| Altered levels of proteins and phosphoproteins, in the absence of early causative transcriptional changes, shape the molecular pathogenesis in the brain of young presymptomatic … K Wiatr, P Piasecki, Ł Marczak, P Wojciechowski, M Kurkowiak, R Płoski, ... Molecular neurobiology 56, 8168-8202, 2019 | 18 | 2019 |
| Graph algorithms for DNA sequencing–origins, current models and the future J Blazewicz, M Kasprzak, M Kierzynka, W Frohmberg, A Swiercz, ... European Journal of Operational Research 264 (3), 799-812, 2018 | 18 | 2018 |
| Iron nitride thin films: Growth, structure, and properties P Wojciechowski, M Lewandowski Crystal Growth & Design 22 (7), 4618-4639, 2022 | 15 | 2022 |
| Simultaneous detection of mutations and copy number variation of NPM1 in the acute myeloid leukemia using multiplex ligation-dependent probe amplification M Marcinkowska-Swojak, L Handschuh, P Wojciechowski, M Goralski, ... Mutation Research/Fundamental and Molecular Mechanisms of Mutagenesis 786, 14-26, 2016 | 13 | 2016 |
| Some remarks on evaluating the quality of the multiple sequence alignment based on the BAliBASE benchmark J Błażewicz, P Formanowicz, P Wojciechowski International Journal of Applied Mathematics and Computer Science 19 (4 …, 2009 | 12 | 2009 |
| Transcript-Level Dysregulation of BCL2 Family Genes in Acute Myeloblastic Leukemia L Handschuh, P Wojciechowski, M Kazmierczak, K Lewandowski Cancers 13 (13), 3175, 2021 | 11 | 2021 |
| Translational and structural analysis of the shortest legume ENOD40 gene in Lupinus luteus J Podkowinski, A Zmienko, B Florek, P Wojciechowski, A Rybarczyk, ... Acta Biochimica Polonica 56 (1), 89-102, 2009 | 11 | 2009 |
| GeVaDSs–decision support system for novel Genetic Vaccine development process J Blazewicz, M Borowski, W Chaara, P Kedziora, D Klatzmann, ... BMC bioinformatics 13, 1-16, 2012 | 9 | 2012 |
| GRASShopPER—An algorithm for de novo assembly based on GPU alignments A Swiercz, W Frohmberg, M Kierzynka, P Wojciechowski, P Zurkowski, ... PloS one 13 (8), e0202355, 2018 | 8 | 2018 |
| DNA sequence assembly involving an acyclic graph model J Blazewicz, W Frohmberg, P Gawron, M Kasprzak, M Kierzynka, ... Foundations of Computing and Decision Sciences 38 (1), 25-34, 2013 | 8 | 2013 |
| G-MAPSEQ–a new method for mapping reads to a reference genome P Wojciechowski, W Frohmberg, M Kierzynka, P Zurkowski, J Blazewicz Foundations of Computing and Decision Sciences 41 (2), 123-142, 2016 | 7 | 2016 |
| G-PAS 2.0-an improved version of protein alignment tool with an efficient backtracking routine on multiple GPUs W Frohmberg, M Kierzynka, J Blazewicz, P Wojciechowski Bulletin of the Polish Academy of Sciences. Technical Sciences 60 (3), 491-494, 2012 | 7 | 2012 |
| Genome-scale de novo assembly using ALGA S Swat, A Laskowski, J Badura, W Frohmberg, P Wojciechowski, ... Bioinformatics 37 (12), 1644-1651, 2021 | 4 | 2021 |
| Symmetry-Induced Structuring of Ultrathin FeO and Fe3O4 Films on Pt(111) and Ru(0001) N Michalak, Z Miłosz, G Peschel, M Prieto, F Xiong, P Wojciechowski, ... Nanomaterials 8 (9), 719, 2018 | 4 | 2018 |
