Timo Maarleveld
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StochPy: A Comprehensive, User-Friendly Tool for Simulating Stochastic Biological Processes
TR Maarleveld, BG Olivier, FJ Bruggeman
PLOS ONE 8 (11), e79345, 2013
602013
Basic concepts and principles of stoichiometric modeling of metabolic networks
TR Maarleveld, RA Khandelwal, BG Olivier, B Teusink, FJ Bruggeman
Biotechnology journal 8 (9), 997-1008, 2013
502013
A data integration and visualization resource for the metabolic network of Synechocystis sp. PCC 6803
TR Maarleveld, J Boele, FJ Bruggeman, B Teusink
Plant physiology 164 (3), 1111-1121, 2014
372014
Interplay between constraints, objectives, and optimality for genome-scale stoichiometric models
TR Maarleveld, MT Wortel, BG Olivier, B Teusink, FJ Bruggeman
PLoS Comput Biol 11 (4), e1004166, 2015
222015
Exploration of the spontaneous fluctuating activity of single enzyme molecules
A Schwabe, TR Maarleveld, FJ Bruggeman
FEBS letters 587 (17), 2744-2752, 2013
132013
Mechanistic stochastic model of histone modification pattern formation
LCM Anink-Groenen, TR Maarleveld, PJ Verschure, FJ Bruggeman
Epigenetics & chromatin 7 (1), 1-16, 2014
122014
Stochastic simulation of prokaryotic two-component signalling indicates stochasticity-induced active-state locking and growth-rate dependent bistability
K Wei, M Moinat, TR Maarleveld, FJ Bruggeman
Molecular BioSystems 10 (9), 2338-2346, 2014
92014
In Silico Design of Self-Optimizing Integrated Metabolic and Gene Regulatory Networks
TR Maarleveld, BK Ng, HM Sauro, KH Kim
BioRxiv, 007658, 2014
2014
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