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AJ Rader
AJ Rader
Director of Data Scientist at DMC Insurance
Adresse e-mail validée de dmcinsurance.com
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Protein flexibility predictions using graph theory
DJ Jacobs, AJ Rader, LA Kuhn, MF Thorpe
Proteins: Structure, Function, and Bioinformatics 44 (2), 150-165, 2001
8872001
Coarse-grained normal mode analysis in structural biology
I Bahar, AJ Rader
Current opinion in structural biology 15 (5), 586-592, 2005
7902005
Protein unfolding: rigidity lost
AJ Rader, BM Hespenheide, LA Kuhn, MF Thorpe
Proceedings of the National Academy of Sciences 99 (6), 3540-3545, 2002
3412002
Global ribosome motions revealed with elastic network model
Y Wang, AJ Rader, I Bahar, RL Jernigan
Journal of structural biology 147 (3), 302-314, 2004
3222004
Elastic network models for understanding biomolecular machinery: from enzymes to supramolecular assemblies
C Chennubhotla, AJ Rader, LW Yang, I Bahar
Physical biology 2 (4), S173, 2005
1962005
Identification of core amino acids stabilizing rhodopsin
AJ Rader, G Anderson, B Isin, HG Khorana, I Bahar, J Klein-Seetharaman
Proceedings of the National Academy of Sciences 101 (19), 7246-7251, 2004
1872004
Identifying protein folding cores from the evolution of flexible regions during unfolding
BM Hespenheide, AJ Rader, MF Thorpe, LA Kuhn
Journal of Molecular Graphics and Modelling 21 (3), 195-207, 2002
1612002
Protein flexibility and dynamics using constraint theory
MF Thorpe, M Lei, AJ Rader, DJ Jacobs, LA Kuhn
Journal of Molecular Graphics and Modelling 19 (1), 60-69, 2001
1582001
o GNM: online computation of structural dynamics using the Gaussian Network Model
LW Yang, AJ Rader, X Liu, CJ Jursa, SC Chen, HA Karimi, I Bahar
Nucleic acids research 34 (suppl_2), W24-W31, 2006
1512006
iGNM: a database of protein functional motions based on Gaussian Network Model
LW Yang, X Liu, CJ Jursa, M Holliman, AJ Rader, HA Karimi, I Bahar
Bioinformatics 21 (13), 2978-2987, 2005
1432005
Endoglucanases: insights into thermostability for biofuel applications
RM Yennamalli, AJ Rader, AJ Kenny, JD Wolt, TZ Sen
Biotechnology for biofuels 6 (1), 1-9, 2013
1192013
Maturation dynamics of bacteriophage HK97 capsid
AJ Rader, DH Vlad, I Bahar
Structure 13 (3), 413-421, 2005
1042005
Folding core predictions from network models of proteins
AJ Rader, I Bahar
Polymer 45 (2), 659-668, 2004
822004
Generic rigidity of network glasses
MF Thorpe, DJ Jacobs, NV Chubynsky, AJ Rader
Rigidity theory and applications, 239-277, 2002
622002
The Gaussian network model: Theory and applications
AJ Rader, C Chennubhotla, LW Yang, I Bahar
Normal mode analysis, 65-88, 2005
612005
Thermostability in endoglucanases is fold-specific
RM Yennamalli, AJ Rader, JD Wolt, TZ Sen
BMC structural biology 11 (1), 1-15, 2011
592011
Thermostability in rubredoxin and its relationship to mechanical rigidity
AJ Rader
Physical Biology 7 (1), 016002, 2009
552009
Correlating allostery with rigidity
AJ Rader, SM Brown
Molecular bioSystems 7 (2), 464-471, 2011
532011
Predisposition of the dark state of rhodopsin to functional changes in structure
B Isin, AJ Rader, HK Dhiman, J Klein‐Seetharaman, I Bahar
PROTEINS: Structure, Function, and Bioinformatics 65 (4), 970-983, 2006
492006
Coarse-grained models: getting more with less
AJ Rader
Current opinion in pharmacology 10 (6), 753-759, 2010
342010
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