Ronald Taylor

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Christian StoeckertReseach Professor of Genetics, University of PennsylvaniaVerified email at upenn.edu
John QuackenbushHarvard T.H. Chan School of Public Health, Channing Division of Network Medicine, and Dana-FarberVerified email at hsph.harvard.edu
Helen ParkinsonEuropean Bioinformatics Institute - Head of Knowledge Management Section, Team LeaderVerified email at ebi.ac.uk
Alvis BrazmaSenior Scientist, European Bioinformatics Institute, EMBLVerified email at ebi.ac.uk
Helen CaustonColumbia UniversityVerified email at cumc.columbia.edu
Paul SpellmanOregon Health & Sciences UniversityVerified email at ohsu.edu
Pascal HingampAssociate Professor, Aix Marseille University, FranceVerified email at univ-amu.fr
Gavin SherlockProfessor of Genetics, Stanford UniversityVerified email at stanford.edu
John MateseBioinformatics, Princeton UniversityVerified email at Princeton.EDU
Ugis SarkansTechnical team leader, EMBL-EBIVerified email at ebi.ac.uk
Jason McDermottScientist Pacific Northwest National LaboratoryVerified email at pnl.gov
Philippe Rocca-SerraUniversity of OxfordVerified email at oerc.ox.ac.uk
Jaak ViloProf. of Bioinformatics, Institute of Computer Science, University of Tartu, EstoniaVerified email at ut.ee
Martin VingronMax-Planck-Institut für molekulare GenetikVerified email at molgen.mpg.de
Susanna-Assunta SansoneUniversity of Oxford, Professor of Data Readiness; Oxford e-Research Centre, Associate Director.Verified email at oerc.ox.ac.uk
Galya OrrScientist, Pacific Northwest National LaboratoryVerified email at pnnl.gov
Joseph A. WhiteDana-Farber Cancer InstituteVerified email at jimmy.harvard.edu
H Steven WileyLaboratory Fellow, Pacific Northwest National LaboratoryVerified email at pnnl.gov
Christopher HenryComputational Biologist, Argonne National LaboratoryVerified email at mcs.anl.gov
Joshua AldrichUniversity of WashingtonVerified email at uw.edu

Ronald Taylor

Supervisory Biologist (Bioinformatics) at the National Cancer Institute

Verified email at nih.gov - Homepage

bioinformatics computational biology systems biology biological network inference HPC & Big Data analytics


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Minimum information about a microarray experiment (MIAME)—toward standards for microarray data A Brazma, P Hingamp, J Quackenbush, G Sherlock, P Spellman, ... Nature genetics 29 (4), 365-371, 2001	4762	2001
An overview of the Hadoop/MapReduce/HBase framework and its current applications in bioinformatics RC Taylor BMC bioinformatics 11, 1-6, 2010	678	2010
Genomic expansion of domain archaea highlights roles for organisms from new phyla in anaerobic carbon cycling CJ Castelle, KC Wrighton, BC Thomas, LA Hug, CT Brown, MJ Wilkins, ... Current biology 25 (6), 690-701, 2015	514	2015
Standards for microarray data CA Ball, G Sherlock, H Parkinson, P Rocca-Sera, C Brooksbank, ... Science 298 (5593), 539-539, 2002	208	2002
Submission of microarray data to public repositories CA Ball, A Brazma, H Causton, S Chervitz, R Edgar, P Hingamp, ... PLoS biology 2 (9), e317, 2004	152	2004
The Toxoplasma gondii Cyst Wall Protein CST1 Is Critical for Cyst Wall Integrity and Promotes Bradyzoite Persistence T Tomita, DJ Bzik, YF Ma, BA Fox, LM Markillie, RC Taylor, K Kim, ... PLoS pathogens 9 (12), e1003823, 2013	139	2013
Minimum information specification for in situ hybridization and immunohistochemistry experiments (MISFISHIE) EW Deutsch, CA Ball, JJ Berman, GS Bova, A Brazma, RE Bumgarner, ... Nature biotechnology 26 (3), 305-312, 2008	122	2008
Evidence supporting dissimilatory and assimilatory lignin degradation in Enterobacter lignolyticus SCF1 KM DeAngelis, D Sharma, R Varney, B Simmons, NG Isern, LM Markilllie, ... Frontiers in microbiology 4, 280, 2013	118	2013
GEST: a gene expression search tool based on a novel Bayesian similarity metric L Hunter, RC Taylor, SM Leach, R Simon Bioinformatics 17 (suppl_1), S115-S122, 2001	105	2001
The frameshift signal of HIV-1 involves a potential intramolecular triplex RNA structure JD Dinman, S Richter, EP Plant, RC Taylor, AB Hammell, TM Rana Proceedings of the National Academy of Sciences 99 (8), 5331-5336, 2002	100	2002
Microbial community metabolic modeling: a community data‐driven network reconstruction CS Henry, HC Bernstein, P Weisenhorn, RC Taylor, JY Lee, J Zucker, ... Journal of cellular physiology 231 (11), 2339-2345, 2016	95	2016
Network inference algorithms elucidate Nrf2 regulation of mouse lung oxidative stress RC Taylor, G Acquaah-Mensah, M Singhal, D Malhotra, S Biswal PLoS computational biology 4 (8), e1000166, 2008	92	2008
Identification of putative programmed− 1 ribosomal frameshift signals in large DNA databases AB Hammell, RC Taylor, SW Peltz, JD Dinman Genome research 9 (5), 417-427, 1999	84	1999
Reverse engineering adverse outcome pathways EJ Perkins, JK Chipman, S Edwards, T Habib, F Falciani, R Taylor, ... Environmental toxicology and chemistry 30 (1), 22-38, 2011	80	2011
The highly conserved MraZ protein is a transcriptional regulator in Escherichia coli JM Eraso, LM Markillie, HD Mitchell, RC Taylor, G Orr, W Margolin Journal of bacteriology 196 (11), 2053-2066, 2014	73	2014
Data standards for Omics data: the basis of data sharing and reuse SA Chervitz, EW Deutsch, D Field, H Parkinson, J Quackenbush, ... Bioinformatics for Omics Data: Methods and Protocols, 31-69, 2011	73	2011
Bottlenecks and Hubs in Inferred Networks Are Important for Virulence in Salmonella typhimurium JE McDermott, RC Taylor, H Yoon, F Heffron Journal of Computational Biology 16 (2), 169-180, 2009	65	2009
DNA correlations PJ Munson, RC Taylor, GS Michaels Nature 360 (6405), 636-636, 1992	65	1992
Changes in translational efficiency is a dominant regulatory mechanism in the environmental response of bacteria RC Taylor, BJM Webb Robertson, LM Markillie, MH Serres, BE Linggi, ... Integrative Biology 5 (11), 1393-1406, 2013	46	2013
Distinct Strains of Toxoplasma gondii Feature Divergent Transcriptomes Regardless of Developmental Stage MMK Croken, Y Ma, LM Markillie, RC Taylor, G Orr, LM Weiss, K Kim PLoS One 9 (11), e111297, 2014	38	2014

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