Matthew A Conte
Matthew A Conte
Principal Investigator, Bioinformatics - Viral Genetics, Walter Reed Army Institute of Research
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The genomic substrate for adaptive radiation in African cichlid fish
D Brawand, CE Wagner, YI Li, M Malinsky, I Keller, S Fan, O Simakov, ...
Nature 513 (7518), 375-381, 2014
A high quality assembly of the Nile Tilapia (Oreochromis niloticus) genome reveals the structure of two sex determination regions
MA Conte, WJ Gammerdinger, KL Bartie, DJ Penman, TD Kocher
BMC genomics 18 (1), 1-19, 2017
Origin and Evolution of B Chromosomes in the Cichlid Fish Astatotilapia latifasciata Based on Integrated Genomic Analyses
GT Valente, MA Conte, BEA Fantinatti, DC Cabral-de-Mello, RF Carvalho, ...
Molecular biology and evolution 31 (8), 2061-2072, 2014
A high-resolution map of the Nile tilapia genome: a resource for studying cichlids and other percomorphs
R Guyon, M Rakotomanga, N Azzouzi, JP Coutanceau, C Bonillo, ...
BMC genomics 13 (1), 222, 2012
Chromosome-scale assemblies reveal the structural evolution of African cichlid genomes
MA Conte, R Joshi, EC Moore, SP Nandamuri, WJ Gammerdinger, ...
GigaScience 8 (4), giz030, 2019
Integrated analysis of miRNA and mRNA expression profiles in tilapia gonads at an early stage of sex differentiation
W Tao, L Sun, H Shi, Y Cheng, D Jiang, B Fu, MA Conte, ...
BMC genomics 17 (1), 1-13, 2016
An improved genome reference for the African cichlid, Metriaclima zebra
MA Conte, TD Kocher
BMC Genomics 16 (1), 724, 2015
Transcriptome display during tilapia sex determination and differentiation as revealed by RNA-Seq analysis
W Tao, J Chen, D Tan, J Yang, L Sun, J Wei, MA Conte, TD Kocher, ...
BMC genomics 19 (1), 1-12, 2018
An EST resource for tilapia based on 17 normalized libraries and assembly of 116,899 sequence tags
BY Lee, A Howe, M Conte, H D'Cotta, E Pepey, JF Baroiller, F Di Palma, ...
BMC genomics 11 (1), 278, 2010
Structure and decay of a proto-Y region in Tilapia, Oreochromis niloticus
WJ Gammerdinger, MA Conte, EA Acquah, RB Roberts, TD Kocher
BMC Genomics 15 (1), 975, 2014
A comparative recombination analysis of human coronaviruses and implications for the SARS-CoV-2 pandemic
S Pollett, MA Conte, M Sanborn, RG Jarman, GM Lidl, K Modjarrad, ...
Scientific reports 11 (1), 1-11, 2021
Mapping of pigmentation QTL on an anchored genome assembly of the cichlid fish, Metriaclima zebra
C T O’Quin, AC Drilea, MA Conte, TD Kocher
BMC genomics 14 (1), 287, 2013
Behavior-dependent cis regulation reveals genes and pathways associated with bower building in cichlid fishes
RA York, C Patil, K Abdilleh, ZV Johnson, MA Conte, MJ Genner, ...
Proceedings of the National Academy of Sciences 115 (47), E11081-E11090, 2018
Dynamic sequence evolution of a sex-associated B chromosome in Lake Malawi cichlid fish
FE Clark, MA Conte, IA Ferreira-Bravo, AB Poletto, C Martins, TD Kocher
Journal of Heredity 108 (1), 53-62, 2017
Interspecific variation in rx1 expression controls opsin expression and causes visual system diversity in african cichlid fishes
JE Schulte, CS O’Brien, MA Conte, KE O’Quin, KL Carleton
Molecular biology and evolution 31 (9), 2297-2308, 2014
Comparative analysis of a sex chromosome from the blackchin tilapia, Sarotherodon melanotheron
WJ Gammerdinger, MA Conte, JF Baroiller, H D’cotta, TD Kocher
BMC genomics 17 (1), 1-10, 2016
Diurnal variation in opsin expression and common housekeeping genes necessitates comprehensive normalization methods for quantitative real‐time PCR analyses
MR Yourick, BA Sandkam, WJ Gammerdinger, D Escobar‐Camacho, ...
Molecular ecology resources 19 (6), 1447-1460, 2019
Evolution of cichlid vision via trans-regulatory divergence
KE O’Quin, JE Schulte, Z Patel, N Kahn, Z Naseer, H Wang, MA Conte, ...
BMC evolutionary biology 12 (1), 1-11, 2012
Novel sex chromosomes in 3 Cichlid fishes from lake Tanganyika
WJ Gammerdinger, MA Conte, BA Sandkam, A Ziegelbecker, ...
Journal of Heredity 109 (5), 489-500, 2018
Circular DNA Intermediate in the Duplication of Nile Tilapia vasa Genes
K Fujimura, MA Conte, TD Kocher
PLoS One 6 (12), e29477, 2011
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