| Missing data and technical variability in single-cell RNA-sequencing experiments SC Hicks, FW Townes, M Teng, RA Irizarry Biostatistics 19 (4), 562-578, 2018 | 453 | 2018 |
| Feature selection and dimension reduction for single-cell RNA-Seq based on a multinomial model FW Townes, SC Hicks, MJ Aryee, RA Irizarry Genome biology 20, 1-16, 2019 | 376 | 2019 |
| Quantile normalization of single-cell RNA-seq read counts without unique molecular identifiers FW Townes, RA Irizarry Genome biology 21 (1), 1-17, 2020 | 29 | 2020 |
| Predicting subnational ebola virus disease epidemic dynamics from sociodemographic indicators L Valeri, O Patterson-Lomba, Y Gurmu, A Ablorh, J Bobb, FW Townes, ... PloS one 11 (10), e0163544, 2016 | 23 | 2016 |
| Nonnegative spatial factorization applied to spatial genomics FW Townes, BE Engelhardt Nature Methods 20 (2), 229-238, 2023 | 21 | 2023 |
| Contrastive latent variable modeling with application to case-control sequencing experiments A Jones, FW Townes, D Li, BE Engelhardt The Annals of Applied Statistics 16 (3), 1268-1291, 2022 | 13 | 2022 |
| Nonnegative spatial factorization FW Townes, BE Engelhardt arXiv preprint arXiv:2110.06122, 2021 | 11 | 2021 |
| Identifying longevity associated genes by integrating gene expression and curated annotations FW Townes, K Carr, JW Miller PLoS Computational Biology 16 (11), e1008429, 2020 | 7 | 2020 |
| Varying-censoring aware matrix factorization for single cell RNA-sequencing FW Townes, SC Hicks, MJ Aryee, RA Irizarry biorxiv, 166736, 2017 | 7 | 2017 |
| Alignment of spatial genomics data using deep Gaussian processes A Jones, FW Townes, D Li, BE Engelhardt Nature Methods 20 (9), 1379-1387, 2023 | 6 | 2023 |
| A unifying framework for rare variant association testing in family-based designs, including higher criticism approaches, SKATs, and burden tests J Hecker, FW Townes, P Kachroo, C Laurie, J Lasky-Su, J Ziniti, MH Cho, ... Bioinformatics 36 (22-23), 5432-5438, 2020 | 6 | 2020 |
| Review of probability distributions for modeling count data FW Townes arXiv preprint arXiv:2001.04343, 2020 | 6 | 2020 |
| Alignment of spatial genomics and histology data using deep Gaussian processes A Jones, FW Townes, D Li, BE Engelhardt BioRxiv, 2022.01. 10.475692, 2022 | 5 | 2022 |
| Generalized principal component analysis FW Townes arXiv preprint arXiv:1907.02647, 2019 | 5 | 2019 |
| Family‐based tests for associating haplotypes with general phenotype data: Improving the FBAT‐haplotype algorithm J Hecker, X Xu, FW Townes, H Loehlein Fier, C Corcoran, N Laird, ... Genetic epidemiology 42 (1), 123-126, 2018 | 5 | 2018 |
| Telescoping bimodal latent Dirichlet allocation to identify expression QTLs across tissues ADH Gewirtz, FW Townes, BE Engelhardt Life Science Alliance 5 (12), 2022 | 4 | 2022 |
| Expression QTLs in single-cell sequencing data ADH Gewirtz, FW Townes, BE Engelhardt bioRxiv, 2022.08. 14.503915, 2022 | 4 | 2022 |
| Author correction: feature selection and dimension reduction for single-cell RNA-Seq based on a multinomial model FW Townes, SC Hicks, MJ Aryee, RA Irizarry Genome Biol 21, 179, 2020 | 4 | 2020 |
| Thermal preference and species range in mountaintop salamanders and their widespread competitors DM Marsh, FW Townes, KM Cotter, K Farroni, KL McCreary, RL Petry, ... Journal of Herpetology 53 (2), 96-103, 2019 | 3 | 2019 |
| Cerebellar contributions to a brainwide network for flexible behavior JL Verpeut, S Bergeler, M Kislin, FW Townes, U Klibaite, ... bioRxiv, 2021 | 2 | 2021 |
Rafael A IrizarryProfessor, Biostatistics and Computational Biology, Dana-Farber and HarvardAdresse e-mail validée de ds.dfci.harvard.edu
