Pufeng Du
Pufeng Du
Tianjin University; Tsinghua University; City University of Hong Kong
Adresse e-mail validée de tju.edu.cn - Page d'accueil
Titre
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PseAAC-Builder: A cross-platform stand-alone program for generating various special Chou’s pseudo-amino acid compositions
P Du, X Wang, C Xu, Y Gao
Analytical biochemistry 425 (2), 117-119, 2012
3052012
PseAAC-General: fast building various modes of general form of Chou’s pseudo-amino acid composition for large-scale protein datasets
P Du, S Gu, Y Jiao
International journal of molecular sciences 15 (3), 3495-3506, 2014
2792014
Prediction of protein submitochondria locations by hybridizing pseudo-amino acid composition with various physicochemical features of segmented sequence
P Du, Y Li
BMC bioinformatics 7 (1), 1-8, 2006
1992006
Performance measures in evaluating machine learning based bioinformatics predictors for classifications
Y Jiao, P Du
Quantitative Biology 4 (4), 320-330, 2016
1222016
SubChlo: predicting protein subchloroplast locations with pseudo-amino acid composition and the evidence-theoretic K-nearest neighbor (ET-KNN) algorithm
P Du, S Cao, Y Li
Journal of theoretical biology 261 (2), 330-335, 2009
722009
CPPred-FL: a sequence-based predictor for large-scale identification of cell-penetrating peptides by feature representation learning
X Qiang, C Zhou, X Ye, P Du, R Su, L Wei
Briefings in bioinformatics 21 (1), 11-23, 2020
542020
Prediction of Golgi-resident protein types using general form of Chou's pseudo-amino acid compositions: approaches with minimal redundancy maximal relevance feature selection
YS Jiao, PF Du
Journal of theoretical biology 402, 38-44, 2016
512016
Identifying human kinase-specific protein phosphorylation sites by integrating heterogeneous information from various sources
T Li, P Du, N Xu
PloS one 5 (11), e15411, 2010
492010
Prediction of C-to-U RNA editing sites in plant mitochondria using both biochemical and evolutionary information
P Du, Y Li
Journal of Theoretical Biology 253 (3), 579-586, 2008
492008
Recent progress in predicting protein sub-subcellular locations
P Du, T Li, X Wang
Expert Review of Proteomics 8 (3), 391-404, 2011
452011
Predicting protein submitochondrial locations by incorporating the positional-specific physicochemical properties into Chou's general pseudo-amino acid compositions
YS Jiao, PF Du
Journal of theoretical biology 416, 81-87, 2017
432017
Predicting multisite protein subcellular locations: progress and challenges
P Du, C Xu
Expert review of proteomics 10 (3), 227-237, 2013
402013
SubMito-PSPCP: predicting protein submitochondrial locations by hybridizing positional specific physicochemical properties with pseudoamino acid compositions
P Du, Y Yu
BioMed research international 2013, 2013
352013
A brief review on software tools in generating Chou's pseudo-factor representations for all types of biological sequences
W Zhao, L Wang, TX Zhang, ZN Zhao, PF Du
Protein and peptide letters 25 (9), 822-829, 2018
312018
Predicting Golgi-resident protein types using pseudo amino acid compositions: Approaches with positional specific physicochemical properties
YS Jiao, PF Du
Journal of theoretical biology 391, 35-42, 2016
302016
dbRES: a web-oriented database for annotated RNA editing sites
T He, P Du, Y Li
Nucleic acids research 35 (suppl_1), D141-D144, 2007
302007
Predicting human protein subcellular locations by the ensemble of multiple predictors via protein-protein interaction network with edge clustering coefficients
P Du, L Wang
PloS one 9 (1), e86879, 2014
262014
CURE-Chloroplast: a chloroplast C-to-U RNA editing predictor for seed plants
P Du, L Jia, Y Li
BMC bioinformatics 10 (1), 1-8, 2009
262009
Subcellular localization prediction for human internal and organelle membrane proteins with projected gene ontology scores
P Du, Y Tian, Y Yan
Journal of theoretical biology 313, 61-67, 2012
232012
Prediction of C-to-U RNA editing sites in higher plant mitochondria using only nucleotide sequence features
P Du, T He, Y Li
Biochemical and biophysical research communications 358 (1), 336-341, 2007
202007
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