| Localization in the crowd with topological constraints S Abousamra, M Hoai, D Samaras, C Chen Proceedings of the AAAI Conference on Artificial Intelligence 35 (2), 872-881, 2021 | 87 | 2021 |
| Utilizing automated breast cancer detection to identify spatial distributions of tumor-infiltrating lymphocytes in invasive breast cancer H Le, R Gupta, L Hou, S Abousamra, D Fassler, L Torre-Healy, RA Moffitt, ... The American journal of pathology 190 (7), 1491-1504, 2020 | 87 | 2020 |
| Deep learning-based image analysis methods for brightfield-acquired multiplex immunohistochemistry images DJ Fassler, S Abousamra, R Gupta, C Chen, M Zhao, D Paredes, ... Diagnostic pathology 15 (1), 1-11, 2020 | 58 | 2020 |
| Deep learning-based mapping of tumor infiltrating lymphocytes in whole slide images of 23 types of cancer S Abousamra, R Gupta, L Hou, R Batiste, T Zhao, A Shankar, A Rao, ... Frontiers in oncology 11, 806603, 2022 | 26 | 2022 |
| Weakly-supervised deep stain decomposition for multiplex IHC images S Abousamra, D Fassler, L Hou, Y Zhang, R Gupta, T Kurc, ... 2020 IEEE 17th International Symposium on Biomedical Imaging (ISBI), 481-485, 2020 | 22 | 2020 |
| Multi-class cell detection using spatial context representation S Abousamra, D Belinsky, J Van Arnam, F Allard, E Yee, R Gupta, T Kurc, ... Proceedings of the IEEE/CVF International Conference on Computer Vision …, 2021 | 17 | 2021 |
| Federated learning for the classification of tumor infiltrating lymphocytes U Baid, S Pati, TM Kurc, R Gupta, E Bremer, S Abousamra, SP Thakur, ... arXiv preprint arXiv:2203.16622, 2022 | 15 | 2022 |
| Exascale deep learning to accelerate cancer research RM Patton, JT Johnston, SR Young, CD Schuman, TE Potok, DC Rose, ... 2019 IEEE International Conference on Big Data (Big Data), 1488-1496, 2019 | 15 | 2019 |
| Learning from thresholds: fully automated classification of tumor infiltrating lymphocytes for multiple cancer types S Abousamra, L Hou, R Gupta, C Chen, D Samaras, T Kurc, R Batiste, ... arXiv preprint arXiv:1907.03960, 2019 | 15 | 2019 |
| GaNDLF: the generally nuanced deep learning framework for scalable end-to-end clinical workflows S Pati, SP Thakur, İE Hamamcı, U Baid, B Baheti, M Bhalerao, O Güley, ... Communications Engineering 2 (1), 23, 2023 | 11 | 2023 |
| Localization and tracking in 4D fluorescence microscopy imagery S Abousamra, S Adar, N Elia, R Shilkrot Proceedings of the IEEE conference on computer vision and pattern …, 2018 | 6 | 2018 |
| Fair and adaptive online set-based cache partitioning S Abousamra, A El-Mahdy, S Selim The 2011 International Conference on Computer Engineering & Systems, 9-16, 2011 | 5 | 2011 |
| Xiao Ling Hu C Li, X Hu, S Abousamra, C Chen, A Konwer, X Xu, J Bae, P Prasanna, ... | 4 | 2018 |
| ChampKit: a framework for rapid evaluation of deep neural networks for patch-based histopathology classification JR Kaczmarzyk, R Gupta, TM Kurc, S Abousamra, JH Saltz, PK Koo Computer Methods and Programs in Biomedicine, 107631, 2023 | 3 | 2023 |
| Calibrating uncertainty for semi-supervised crowd counting C Li, X Hu, S Abousamra, C Chen arXiv preprint arXiv:2308.09887, 2023 | 2 | 2023 |
| Evaluating histopathology transfer learning with ChampKit JR Kaczmarzyk, TM Kurc, S Abousamra, R Gupta, JH Saltz, PK Koo arXiv preprint arXiv:2206.06862, 2022 | 2 | 2022 |
| From whole slide tissues to knowledge: Mapping sub-cellular morphology of cancer T Kurc, A Sharma, R Gupta, L Hou, H Le, S Abousamra, E Bremer, ... Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries …, 2020 | 2 | 2020 |
| Topology-Guided Multi-Class Cell Context Generation for Digital Pathology S Abousamra, R Gupta, T Kurc, D Samaras, J Saltz, C Chen Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern …, 2023 | 1 | 2023 |
| An expandable informatics framework for enhancing central cancer registries with digital pathology specimens, computational imaging tools, and advanced mining capabilities DJ Foran, EB Durbin, W Chen, E Sadimin, A Sharma, I Banerjee, T Kurc, ... Journal of Pathology Informatics 13, 100167, 2022 | 1 | 2022 |
| TopoSemiSeg: Enforcing Topological Consistency for Semi-Supervised Segmentation of Histopathology Images M Xu, X Hu, S Gupta, S Abousamra, C Chen arXiv preprint arXiv:2311.16447, 2023 | | 2023 |
