|Localization in the crowd with topological constraints|
S Abousamra, M Hoai, D Samaras, C Chen
Proceedings of the AAAI Conference on Artificial Intelligence 35 (2), 872-881, 2021
|Utilizing automated breast cancer detection to identify spatial distributions of tumor-infiltrating lymphocytes in invasive breast cancer|
H Le, R Gupta, L Hou, S Abousamra, D Fassler, L Torre-Healy, RA Moffitt, ...
The American journal of pathology 190 (7), 1491-1504, 2020
|Deep learning-based image analysis methods for brightfield-acquired multiplex immunohistochemistry images|
DJ Fassler, S Abousamra, R Gupta, C Chen, M Zhao, D Paredes, ...
Diagnostic pathology 15 (1), 1-11, 2020
|Deep learning-based mapping of tumor infiltrating lymphocytes in whole slide images of 23 types of cancer|
S Abousamra, R Gupta, L Hou, R Batiste, T Zhao, A Shankar, A Rao, ...
Frontiers in oncology 11, 806603, 2022
|Weakly-supervised deep stain decomposition for multiplex IHC images|
S Abousamra, D Fassler, L Hou, Y Zhang, R Gupta, T Kurc, ...
2020 IEEE 17th International Symposium on Biomedical Imaging (ISBI), 481-485, 2020
|Multi-class cell detection using spatial context representation|
S Abousamra, D Belinsky, J Van Arnam, F Allard, E Yee, R Gupta, T Kurc, ...
Proceedings of the IEEE/CVF International Conference on Computer Vision …, 2021
|Federated learning for the classification of tumor infiltrating lymphocytes|
U Baid, S Pati, TM Kurc, R Gupta, E Bremer, S Abousamra, SP Thakur, ...
arXiv preprint arXiv:2203.16622, 2022
|Exascale deep learning to accelerate cancer research|
RM Patton, JT Johnston, SR Young, CD Schuman, TE Potok, DC Rose, ...
2019 IEEE International Conference on Big Data (Big Data), 1488-1496, 2019
|Learning from thresholds: fully automated classification of tumor infiltrating lymphocytes for multiple cancer types|
S Abousamra, L Hou, R Gupta, C Chen, D Samaras, T Kurc, R Batiste, ...
arXiv preprint arXiv:1907.03960, 2019
|GaNDLF: the generally nuanced deep learning framework for scalable end-to-end clinical workflows|
S Pati, SP Thakur, İE Hamamcı, U Baid, B Baheti, M Bhalerao, O Güley, ...
Communications Engineering 2 (1), 23, 2023
|Localization and tracking in 4D fluorescence microscopy imagery|
S Abousamra, S Adar, N Elia, R Shilkrot
Proceedings of the IEEE conference on computer vision and pattern …, 2018
|Fair and adaptive online set-based cache partitioning|
S Abousamra, A El-Mahdy, S Selim
The 2011 International Conference on Computer Engineering & Systems, 9-16, 2011
|Xiao Ling Hu|
C Li, X Hu, S Abousamra, C Chen, A Konwer, X Xu, J Bae, P Prasanna, ...
|ChampKit: a framework for rapid evaluation of deep neural networks for patch-based histopathology classification|
JR Kaczmarzyk, R Gupta, TM Kurc, S Abousamra, JH Saltz, PK Koo
Computer Methods and Programs in Biomedicine, 107631, 2023
|Calibrating uncertainty for semi-supervised crowd counting|
C Li, X Hu, S Abousamra, C Chen
arXiv preprint arXiv:2308.09887, 2023
|Evaluating histopathology transfer learning with ChampKit|
JR Kaczmarzyk, TM Kurc, S Abousamra, R Gupta, JH Saltz, PK Koo
arXiv preprint arXiv:2206.06862, 2022
|From whole slide tissues to knowledge: Mapping sub-cellular morphology of cancer|
T Kurc, A Sharma, R Gupta, L Hou, H Le, S Abousamra, E Bremer, ...
Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries …, 2020
|Topology-Guided Multi-Class Cell Context Generation for Digital Pathology|
S Abousamra, R Gupta, T Kurc, D Samaras, J Saltz, C Chen
Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern …, 2023
|An expandable informatics framework for enhancing central cancer registries with digital pathology specimens, computational imaging tools, and advanced mining capabilities|
DJ Foran, EB Durbin, W Chen, E Sadimin, A Sharma, I Banerjee, T Kurc, ...
Journal of Pathology Informatics 13, 100167, 2022
|TopoSemiSeg: Enforcing Topological Consistency for Semi-Supervised Segmentation of Histopathology Images|
M Xu, X Hu, S Gupta, S Abousamra, C Chen
arXiv preprint arXiv:2311.16447, 2023