|Primer3—new capabilities and interfaces|
A Untergasser, I Cutcutache, T Koressaar, J Ye, BC Faircloth, M Remm, ...
Nucleic acids research 40 (15), e115-e115, 2012
|Whole-genome analyses resolve early branches in the tree of life of modern birds|
ED Jarvis, S Mirarab, AJ Aberer, B Li, P Houde, C Li, SYW Ho, ...
Science 346 (6215), 1320-1331, 2014
|msatcommander: detection of microsatellite repeat arrays and automated, locus‐specific primer design|
Molecular ecology resources 8 (1), 92-94, 2008
|Ultraconserved elements anchor thousands of genetic markers spanning multiple evolutionary timescales|
BC Faircloth, JE McCormack, NG Crawford, MG Harvey, RT Brumfield, ...
Systematic biology 61 (5), 717-726, 2012
|The drivers of tropical speciation|
BT Smith, JE McCormack, AM Cuervo, MJ Hickerson, A Aleixo, ...
Nature 515 (7527), 406-409, 2014
|A phylogeny of birds based on over 1,500 loci collected by target enrichment and high-throughput sequencing|
JE McCormack, MG Harvey, BC Faircloth, NG Crawford, TC Glenn, ...
PloS one 8 (1), e54848, 2013
|PHYLUCE is a software package for the analysis of conserved genomic loci|
Bioinformatics 32 (5), 786-788, 2016
|More than 1000 ultraconserved elements provide evidence that turtles are the sister group of archosaurs|
NG Crawford, BC Faircloth, JE McCormack, RT Brumfield, K Winker, ...
Biology letters 8 (5), 783-786, 2012
|Ultraconserved elements are novel phylogenomic markers that resolve placental mammal phylogeny when combined with species-tree analysis|
JE McCormack, BC Faircloth, NG Crawford, PA Gowaty, RT Brumfield, ...
Genome research 22 (4), 746-754, 2012
|Target capture and massively parallel sequencing of ultraconserved elements for comparative studies at shallow evolutionary time scales|
BT Smith, MG Harvey, BC Faircloth, TC Glenn, RT Brumfield
Systematic biology 63 (1), 83-95, 2014
|Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs|
RE Green, EL Braun, J Armstrong, D Earl, N Nguyen, G Hickey, ...
Science 346 (6215), 2014
|Implementing and testing the multispecies coalescent model: a valuable paradigm for phylogenomics|
SV Edwards, Z Xi, A Janke, BC Faircloth, JE McCormack, TC Glenn, ...
Molecular phylogenetics and evolution 94, 447-462, 2016
|Not all sequence tags are created equal: designing and validating sequence identification tags robust to indels|
BC Faircloth, TC Glenn
PloS one 7 (8), e42543, 2012
|A phylogenomic perspective on the radiation of ray-finned fishes based upon targeted sequencing of ultraconserved elements (UCEs)|
BC Faircloth, L Sorenson, F Santini, ME Alfaro
PloS one 8 (6), e65923, 2013
|Phylogenomic insights into the evolution of stinging wasps and the origins of ants and bees|
MG Branstetter, BN Danforth, JP Pitts, BC Faircloth, PS Ward, ...
Current Biology 27 (7), 1019-1025, 2017
|A phylogenomic analysis of turtles|
NG Crawford, JF Parham, AB Sellas, BC Faircloth, TC Glenn, ...
Molecular phylogenetics and evolution 83, 250-257, 2015
|Sequence capture versus restriction site associated DNA sequencing for shallow systematics|
MG Harvey, BT Smith, TC Glenn, BC Faircloth, RT Brumfield
Systematic biology 65 (5), 910-924, 2016
|Target enrichment of ultraconserved elements from arthropods provides a genomic perspective on relationships among H ymenoptera|
BC Faircloth, MG Branstetter, ND White, SG Brady
Molecular ecology resources 15 (3), 489-501, 2015
|Adapterama I: universal stubs and primers for 384 unique dual-indexed or 147,456 combinatorially-indexed Illumina libraries (iTru & iNext)|
TC Glenn, RA Nilsen, TJ Kieran, JG Sanders, NJ Bayona-Vásquez, ...
PeerJ 7, e7755, 2019
|Tectonic collision and uplift of Wallacea triggered the global songbird radiation|
RG Moyle, CH Oliveros, MJ Andersen, PA Hosner, BW Benz, JD Manthey, ...
Nature Communications 7 (1), 1-7, 2016