Follow
Ahmad Abdullah Mannan
Ahmad Abdullah Mannan
Research Associate, Department of Bioengineering
Verified email at imperial.ac.uk - Homepage
Title
Cited by
Cited by
Year
Fundamental design principles for transcription-factor-based metabolite biosensors
AA Mannan, D Liu, F Zhang, DA Oyarzún
ACS synthetic biology 6 (10), 1851-1859, 2017
1742017
Modeling and simulation of the main metabolism in Escherichia coli and its several single-gene knockout mutants with experimental verification
TAA Kadir, AA Mannan, AM Kierzek, J McFadden, K Shimizu
Microbial cell factories 9, 1-21, 2010
1072010
Dynamic metabolic control: towards precision engineering of metabolism
D Liu, AA Mannan, Y Han, DA Oyarzún, F Zhang
Journal of Industrial Microbiology and Biotechnology 45 (7), 535-543, 2018
942018
Interrogation of global mutagenesis data with a genome scale model of Neisseria meningitidis to assess gene fitness in vitro and in sera
TA Mendum, J Newcombe, AA Mannan, AM Kierzek, J McFadden
Genome biology 12, 1-15, 2011
432011
Integrating kinetic model of E. coli with genome scale metabolic fluxes overcomes its open system problem and reveals bistability in central metabolism
AA Mannan, Y Toya, K Shimizu, J McFadden, AM Kierzek, A Rocco
PloS one 10 (10), e0139507, 2015
362015
MUFINS: multi-formalism interaction network simulator
H Wu, A Von Kamp, V Leoncikas, W Mori, N Sahin, A Gevorgyan, C Linley, ...
NPJ systems biology and applications 2 (1), 1-10, 2016
252016
Designing an irreversible metabolic switch for scalable induction of microbial chemical production
AA Mannan, DG Bates
Nature Communications 12 (3419), 2021
162021
Metabolite sequestration enables rapid recovery from fatty acid depletion in Escherichia coli
CJ Hartline, AA Mannan, D Liu, F Zhang, DA Oyarzún
MBio 11 (2), 10.1128/mbio. 03112-19, 2020
162020
Trade-offs in biosensor optimization for dynamic pathway engineering
BK Verma, AA Mannan, F Zhang, DA Oyarzún
ACS synthetic biology 11 (1), 228-240, 2021
142021
Multiobjective optimization of gene circuits for metabolic engineering
I Otero-Muras, AA Mannan, JR Banga, DA Oyarzún
IFAC-PapersOnLine 52 (26), 13-16, 2019
72019
gcFront: a tool for determining a Pareto front of growth-coupled cell factory designs
L Legon, C Corre, DG Bates, AA Mannan
Bioinformatics 38 (14), 3657-3659, 2022
42022
Integration of Kinetic and Whole-Cell Stoichiometric Model for Hybrid Simulations of Bacterial Central Metabolism
AA Mannan
PQDT-Global, 2012
12012
In silico elucidation of key drivers of S. aureus-S. epidermidis-induced skin damage in atopic dermatitis lesions
J Lee, AA Mannan, T Miyano, AD Irvine, RJ Tanaka
JID Innovations, 100269, 2024
2024
Natural host feedback simplifies the design of metabolic switches
APS Darlington, AA Mannan, DG Bates
2023 62nd IEEE Conference on Decision and Control (CDC), 2693-2698, 2023
2023
1012 In silico prediction of the targeted killing of S. aureus in coinfections with S. epidermidis in atopic dermatitis lesions
AA Mannan, J Lee, T Miyano, R Tanaka
Journal of Investigative Dermatology 143 (5), S173, 2023
2023
Signaling Tug-of-War Delivers the Whole Message
AY Weiße, AA Mannan, DA Oyarzún
Cell Systems 3 (5), 414-416, 2016
2016
The system can't perform the operation now. Try again later.
Articles 1–16