| Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure DH Mathews, J Sabina, M Zuker, DH Turner Journal of molecular biology 288 (5), 911-940, 1999 | 4809 | 1999 |
| Improved free-energy parameters for predictions of RNA duplex stability. SM Freier, R Kierzek, JA Jaeger, N Sugimoto, MH Caruthers, T Neilson, ... Proceedings of the National Academy of Sciences 83 (24), 9373-9377, 1986 | 2035 | 1986 |
| Incorporating chemical modification constraints into a dynamic programming algorithm for prediction of RNA secondary structure DH Mathews, MD Disney, JL Childs, SJ Schroeder, M Zuker, DH Turner Proceedings of the National Academy of Sciences 101 (19), 7287-7292, 2004 | 1842 | 2004 |
| Algorithms and thermodynamics for RNA secondary structure prediction: a practical guide M Zuker, DH Mathews, DH Turner RNA biochemistry and biotechnology, 11-43, 1999 | 1455 | 1999 |
| Thermodynamic Parameters for an Expanded Nearest-Neighbor Model for Formation of RNA Duplexes with Watson−Crick Base Pairs † T Xia, J SantaLucia Jr, ME Burkard, R Kierzek, SJ Schroeder, X Jiao, ... Biochemistry 37 (42), 14719-14735, 1998 | 1442 | 1998 |
| Improved predictions of secondary structures for RNA. JA Jaeger, DH Turner, M Zuker Proceedings of the National Academy of Sciences 86 (20), 7706-7710, 1989 | 1156 | 1989 |
| RNA structure prediction DH Turner, N Sugimoto, SM Freier Annual review of biophysics and biophysical chemistry 17 (1), 167-192, 1988 | 891 | 1988 |
| Base-stacking and base-pairing contributions to helix stability: thermodynamics of double-helix formation with CCGG, CCGGp, CCGGAp, ACCGGp, CCGGUp, and ACCGGUp M Petersheim, DH Turner Biochemistry 22 (2), 256-263, 1983 | 721 | 1983 |
| Coaxial stacking of helixes enhances binding of oligoribonucleotides and improves predictions of RNA folding. AE Walter, DH Turner, J Kim, MH Lyttle, P Müller, DH Mathews, M Zuker Proceedings of the National Academy of Sciences 91 (20), 9218-9222, 1994 | 635 | 1994 |
| NNDB: the nearest neighbor parameter database for predicting stability of nucleic acid secondary structure DH Turner, DH Mathews Nucleic acids research 38 (suppl_1), D280-D282, 2010 | 614 | 2010 |
| [17] Predicting optimal and suboptimal secondary structure for RNA JA Jaeger, DH Turner, M Zuker Academic Press 183, 281-306, 1990 | 537 | 1990 |
| Dynalign: an algorithm for finding the secondary structure common to two RNA sequences DH Mathews, DH Turner Journal of molecular biology 317 (2), 191-203, 2002 | 521 | 2002 |
| Prediction of RNA secondary structure by free energy minimization DH Mathews, DH Turner Current opinion in structural biology 16 (3), 270-278, 2006 | 518 | 2006 |
| [11] Predicting thermodynamic properties of RNA MJ Serra, DH Turner Methods in enzymology 259, 242-261, 1995 | 471 | 1995 |
| Investigation of the Structural Basis for Thermodynamic Stabilities of Tandem GU Mismatches: Solution Structure of (rGAGGUCUC)2 by Two-Dimensional NMR and … JA McDowell, DH Turner Biochemistry 35 (45), 14077-14089, 1996 | 420 | 1996 |
| Predicting oligonucleotide affinity to nucleic acid targets DH Mathews, ME Burkard, SM Freier, JR Wyatt, DH Turner Rna 5 (11), 1458-1469, 1999 | 308 | 1999 |
| Expanded CUG repeat RNAs form hairpins that activate the double-stranded RNA-dependent protein kinase PKR BIN Tian, RJ White, T Xia, S Welle, DH Turner, MB Mathews, CA Thornton Rna 6 (1), 79-87, 2000 | 281 | 2000 |
| Context dependence of hydrogen bond free energy revealed by substitutions in an RNA hairpin J SantaLucia Jr, R Kierzek, DH Turner Science 256 (5054), 217-219, 1992 | 253 | 1992 |
| Thermal unfolding of a group I ribozyme: the low-temperature transition is primarily disruption of tertiary structure AR Banerjee, JA Jaeger, DH Turner Biochemistry 32 (1), 153-163, 1993 | 250 | 1993 |
| Dynamics of ribozyme binding of substrate revealed by fluorescence-detected stopped-flow methods PC Bevilacqua, R Kierzek, KA Johnson, DH Turner Science 258 (5086), 1355-1358, 1992 | 250 | 1992 |
