| The initial state of the human gut microbiome determines its reshaping by antibiotics F Raymond, AA Ouameur, M Déraspe, N Iqbal, H Gingras, B Dridi, ... The ISME journal 10 (3), 707-720, 2016 | 375 | 2016 |
| The resistome of Pseudomonas aeruginosa in relationship to phenotypic susceptibility VN Kos, M Déraspe, RE McLaughlin, JD Whiteaker, PH Roy, RA Alm, ... Antimicrobial agents and chemotherapy 59 (1), 427-436, 2015 | 290 | 2015 |
| Predictive computational phenotyping and biomarker discovery using reference-free genome comparisons A Drouin, S Giguère, M Déraspe, M Marchand, M Tyers, VG Loo, ... BMC genomics 17, 1-15, 2016 | 147 | 2016 |
| Complete sequence of pOZ176, a 500-kilobase IncP-2 plasmid encoding IMP-9-mediated carbapenem resistance, from outbreak isolate Pseudomonas aeruginosa 96 J Xiong, DC Alexander, JH Ma, M Déraspe, DE Low, FB Jamieson, ... Antimicrobial agents and chemotherapy 57 (8), 3775-3782, 2013 | 86 | 2013 |
| Partial recovery of microbiomes after antibiotic treatment F Raymond, M Déraspe, M Boissinot, MG Bergeron, J Corbeil Gut Microbes 7 (5), 428-434, 2016 | 65 | 2016 |
| Culture-enriched human gut microbiomes reveal core and accessory resistance genes F Raymond, M Boissinot, AA Ouameur, M Déraspe, PL Plante, ... Microbiome 7, 1-13, 2019 | 44 | 2019 |
| Machine learning analysis identifies genes differentiating triple negative breast cancers C Kothari, MA Osseni, L Agbo, G Ouellette, M Déraspe, F Laviolette, ... Scientific reports 10 (1), 10464, 2020 | 40 | 2020 |
| Phenetic comparison of prokaryotic genomes using k-mers M Déraspe, F Raymond, S Boisvert, A Culley, PH Roy, F Laviolette, ... Molecular biology and evolution 34 (10), 2716-2729, 2017 | 31 | 2017 |
| Genome and Plasmid Analysis of blaIMP-4-Carrying Citrobacter freundii B38 J Xiong, M Déraspe, N Iqbal, J Ma, FB Jamieson, J Wasserscheid, ... Antimicrobial agents and chemotherapy 60 (11), 6719-6725, 2016 | 25 | 2016 |
| Complete genome of a panresistant Pseudomonas aeruginosa strain, isolated from a patient with respiratory failure in a Canadian community hospital J Xiong, M Déraspe, N Iqbal, S Krajden, W Chapman, K Dewar, PH Roy Genome announcements 5 (22), 10.1128/genomea. 00458-17, 2017 | 22 | 2017 |
| A blaVIM-2 Plasmid Disseminating in Extensively Drug-Resistant Clinical Pseudomonas aeruginosa and Serratia marcescens Isolates E Vilacoba, C Quiroga, M Pistorio, A Famiglietti, H Rodríguez, J Kovensky, ... Antimicrobial agents and chemotherapy 58 (11), 7017-7018, 2014 | 21 | 2014 |
| Genomic analysis of Pseudomonas aeruginosa PA96, the host of carbapenem resistance plasmid pOZ176 M Déraspe, DC Alexander, J Xiong, JH Ma, DE Low, FB Jamieson, ... FEMS Microbiology Letters 356 (2), 212-216, 2014 | 17 | 2014 |
| Genomic diversity and CRISPR‐Cas systems in the cyanobacterium Nostoc in the High Arctic AD Jungblut, F Raymond, MB Dion, S Moineau, V Mohit, GQ Nguyen, ... Environmental Microbiology 23 (6), 2955-2968, 2021 | 11 | 2021 |
| Learning interpretable models of phenotypes from whole genome sequences with the Set Covering Machine A Drouin, S Giguere, V Sagatovich, M Déraspe, F Laviolette, M Marchand, ... arXiv preprint arXiv:1412.1074, 2014 | 11 | 2014 |
| Draft genome sequence of an international clonal lineage 1 Acinetobacter baumannii strain from Argentina E Vilacoba, M Déraspe, GM Traglia, PH Roy, MS Ramírez, D Centrón Genome announcements 2 (6), 10.1128/genomea. 01190-14, 2014 | 8 | 2014 |
| Flexible protein database based on amino acid k-mers M Déraspe, S Boisvert, F Laviolette, PH Roy, J Corbeil Scientific Reports 12 (1), 9101, 2022 | 6 | 2022 |
| Complete Genome Sequences of Klebsiella michiganensis and Citrobacter farmeri, KPC-2-Producers Serially Isolated from a Single Patient JY Abed, M Déraspe, È Bérubé, M D’Iorio, K Dewar, M Boissinot, ... Antibiotics 10 (11), 1408, 2021 | 6 | 2021 |
| Fast protein database as a service with kAAmer M Déraspe, S Boisvert, F Laviolette, PH Roy, J Corbeil bioRxiv, 2020.04. 01.019984, 2020 | 4 | 2020 |
| Serratia marcescens SCH909 as reservoir and source of genetic elements related to wide dissemination of antimicrobial resistance mechanisms AS Gambino, M Déraspe, VE Álvarez, MP Quiroga, J Corbeil, PH Roy, ... FEMS Microbiology Letters 368 (14), fnab086, 2021 | 3 | 2021 |
| Genome sequence of a Klebsiella pneumoniae NDM-1 producer isolated in Quebec city M Déraspe, J Longtin, PH Roy Microbiology Resource Announcements 9 (3), 10.1128/mra. 00829-19, 2020 | 3 | 2020 |
Jacques CorbeilProfessor of Medicine and Canada Research Chair in Medical GenomicsAdresse e-mail validée de genome.ulaval.ca
