Mikael Huss
Mikael Huss
Bioinformatics scientist at Science for Life Laboratory, Stockholm University
Verified email at scilifelab.se
Title
Cited by
Cited by
Year
Integration of external signaling pathways with the core transcriptional network in embryonic stem cells
X Chen, H Xu, P Yuan, F Fang, M Huss, VB Vega, E Wong, YL Orlov, ...
Cell 133 (6), 1106-1117, 2008
25442008
Analysis of the human tissue-specific expression by genome-wide integration of transcriptomics and antibody-based proteomics
L Fagerberg, BM Hallström, P Oksvold, C Kampf, D Djureinovic, ...
Molecular & Cellular Proteomics 13 (2), 397-406, 2014
15592014
Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst
G Guo, M Huss, GQ Tong, C Wang, LL Sun, ND Clarke, P Robson
Developmental cell 18 (4), 675-685, 2010
7612010
Visualization and analysis of gene expression in tissue sections by spatial transcriptomics
PL Ståhl, F Salmén, S Vickovic, A Lundmark, JF Navarro, J Magnusson, ...
Science 353 (6294), 78-82, 2016
5562016
Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity
L Song, Z Zhang, LL Grasfeder, AP Boyle, PG Giresi, BK Lee, ...
Genome research 21 (10), 1757-1767, 2011
5042011
Subnetwork hierarchies of biochemical pathways
P Holme, M Huss, H Jeong
Bioinformatics 19 (4), 532-538, 2003
4882003
The nuclear receptor Nr5a2 can replace Oct4 in the reprogramming of murine somatic cells to pluripotent cells
JCD Heng, B Feng, J Han, J Jiang, P Kraus, JH Ng, YL Orlov, M Huss, ...
Cell stem cell 6 (2), 167-174, 2010
4812010
A genome-wide RNAi screen reveals determinants of human embryonic stem cell identity
NY Chia, YS Chan, B Feng, X Lu, YL Orlov, D Moreau, P Kumar, L Yang, ...
Nature 468 (7321), 316-320, 2010
4552010
Eset partners with Oct4 to restrict extraembryonic trophoblast lineage potential in embryonic stem cells
P Yuan, J Han, G Guo, YL Orlov, M Huss, YH Loh, LP Yaw, P Robson, ...
Genes & development 23 (21), 2507-2520, 2009
2292009
A primer on deep learning in genomics
J Zou, M Huss, A Abid, P Mohammadi, A Torkamani, A Telenti
Nature genetics 51 (1), 12-18, 2019
1882019
HiRIEF LC-MS enables deep proteome coverage and unbiased proteogenomics
RMM Branca, LM Orre, HJ Johansson, V Granholm, M Huss, ...
Nature methods 11 (1), 59, 2014
1812014
Integrative model of genomic factors for determining binding site selection by estrogen receptor‐α
R Joseph, YL Orlov, M Huss, W Sun, S Li Kong, L Ukil, Y Fu Pan, G Li, ...
Molecular systems biology 6 (1), 456, 2010
1752010
The human gut microbiome as a transporter of antibiotic resistance genes between continents
J Bengtsson-Palme, M Angelin, M Huss, S Kjellqvist, E Kristiansson, ...
Antimicrobial agents and chemotherapy 59 (10), 6551-6560, 2015
1572015
Currency and commodity metabolites: their identification and relation to the modularity of metabolic networks
M Huss, P Holme
IET systems biology 1 (5), 280-285, 2007
1242007
Simple cellular and network control principles govern complex patterns of motor behavior
A Kozlov, M Huss, A Lansner, JH Kotaleski, S Grillner
Proceedings of the National Academy of Sciences 106 (47), 20027-20032, 2009
1042009
An international effort towards developing standards for best practices in analysis, interpretation and reporting of clinical genome sequencing results in the CLARITY Challenge
CA Brownstein, AH Beggs, N Homer, B Merriman, WY Timothy, ...
Genome biology 15 (3), 1-18, 2014
872014
Reprogramming of Yersinia from virulent to persistent mode revealed by complex in vivo RNA-seq analysis
K Avican, A Fahlgren, M Huss, AK Heroven, M Beckstette, P Dersch, ...
PLoS Pathog 11 (1), e1004600, 2015
612015
Q&A: ChIP-seq technologies and the study of gene regulation
ET Liu, S Pott, M Huss
BMC biology 8 (1), 56, 2010
522010
The human skeletal muscle transcriptome: sex differences, alternative splicing, and tissue homogeneity assessed with RNA sequencing
ME Lindholm, M Huss, BW Solnestam, S Kjellqvist, J Lundeberg, ...
The FASEB Journal 28 (10), 4571-4581, 2014
502014
Role-similarity based functional prediction in networked systems: application to the yeast proteome
P Holme, M Huss
Journal of the Royal Society Interface 2 (4), 327-333, 2005
492005
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Articles 1–20